BLASTX nr result
ID: Glycyrrhiza24_contig00024916
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00024916 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACJ85144.1| unknown [Medicago truncatula] 111 7e-23 ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul... 111 7e-23 ref|XP_003556366.1| PREDICTED: DNA repair protein XRCC4-like [Gl... 100 1e-19 ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 99 3e-19 ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 99 5e-19 >gb|ACJ85144.1| unknown [Medicago truncatula] Length = 135 Score = 111 bits (277), Expect = 7e-23 Identities = 49/72 (68%), Positives = 62/72 (86%) Frame = +3 Query: 24 MEETKRHTCMKLQIRNCTTSGEAIFVKGTWFDTHFDLAITDGHTAWYCHVSEEEVKERAA 203 MEE KRHTC+KLQ+ T E+IFVKGTWF+THF+L+ITDG T+W+C+ SE+EVK+RAA Sbjct: 1 MEEKKRHTCLKLQL----TEEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVKQRAA 56 Query: 204 QWDQPVSEYLQL 239 QWDQPV EY++L Sbjct: 57 QWDQPVEEYVEL 68 >ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula] gi|355479842|gb|AES61045.1| DNA repair protein XRCC4 [Medicago truncatula] Length = 256 Score = 111 bits (277), Expect = 7e-23 Identities = 49/72 (68%), Positives = 62/72 (86%) Frame = +3 Query: 24 MEETKRHTCMKLQIRNCTTSGEAIFVKGTWFDTHFDLAITDGHTAWYCHVSEEEVKERAA 203 MEE KRHTC+KLQ+ T E+IFVKGTWF+THF+L+ITDG T+W+C+ SE+EVK+RAA Sbjct: 1 MEEKKRHTCLKLQL----TEEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVKQRAA 56 Query: 204 QWDQPVSEYLQL 239 QWDQPV EY++L Sbjct: 57 QWDQPVEEYVEL 68 >ref|XP_003556366.1| PREDICTED: DNA repair protein XRCC4-like [Glycine max] Length = 256 Score = 100 bits (249), Expect = 1e-19 Identities = 49/73 (67%), Positives = 54/73 (73%) Frame = +3 Query: 21 MMEETKRHTCMKLQIRNCTTSGEAIFVKGTWFDTHFDLAITDGHTAWYCHVSEEEVKERA 200 M EET+R +C KL I GE IFVK TWF THF LA+TDG TAW+CH S EEVK+RA Sbjct: 1 MEEETERFSCSKLLI----PKGEPIFVKATWFPTHFHLAVTDGITAWHCHPSAEEVKQRA 56 Query: 201 AQWDQPVSEYLQL 239 AQWD PVSEYL L Sbjct: 57 AQWDLPVSEYLNL 69 >ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis] gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4, putative [Ricinus communis] Length = 265 Score = 99.4 bits (246), Expect = 3e-19 Identities = 46/70 (65%), Positives = 54/70 (77%) Frame = +3 Query: 30 ETKRHTCMKLQIRNCTTSGEAIFVKGTWFDTHFDLAITDGHTAWYCHVSEEEVKERAAQW 209 ET RHTC+KL+I E IFVKGTWFD+HF L+ITDG AW C+ +E +VKERAAQW Sbjct: 11 ETARHTCLKLEIT------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQW 64 Query: 210 DQPVSEYLQL 239 DQPVSEY+ L Sbjct: 65 DQPVSEYINL 74 >ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera] Length = 259 Score = 98.6 bits (244), Expect = 5e-19 Identities = 45/72 (62%), Positives = 55/72 (76%) Frame = +3 Query: 24 MEETKRHTCMKLQIRNCTTSGEAIFVKGTWFDTHFDLAITDGHTAWYCHVSEEEVKERAA 203 ME T RH+C+KLQI N E IF+K TWF +HF L+ITDG AW C+ SE+EV+ERAA Sbjct: 1 MEPTPRHSCLKLQIPN---QSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAA 57 Query: 204 QWDQPVSEYLQL 239 QWDQPVS+Y+ L Sbjct: 58 QWDQPVSDYIAL 69