BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024908
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   530   e-148
ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferas...   524   e-146
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...   521   e-145
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   438   e-120
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   435   e-119

>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  530 bits (1366), Expect = e-148
 Identities = 283/346 (81%), Positives = 296/346 (85%), Gaps = 10/346 (2%)
 Frame = -3

Query: 1381 SQLCSLQTLNCRPKPPL----------PAQYSTAVARRRTVYVACGGGSSRASTRNTDDY 1232
            S LCSLQT      PP+          PA  STA  RRRT YV C    SRASTR+ DDY
Sbjct: 4    SSLCSLQTF-----PPISHALLNRHHKPAHDSTAGVRRRTPYVVCAEKGSRASTRSADDY 58

Query: 1231 HATLKALNSKGRFPRKSLGQHYMLNSDINEQLAGVAGVEQGDVVLEIGPGTGSLTNVLIN 1052
            HATLKALNSKGRFPRKSLGQHYMLN+DIN+QLAG AGVEQGDVVLEIGPGTGSLTNVL+N
Sbjct: 59   HATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVLLN 118

Query: 1051 SGAFVLAVEKDKHMAELVSERFSSTGKFKVLNEDIVKCHVRSHMSSLVGSTKQTDPETRS 872
            SGAFVLAVEKDKHMA LVSERFSSTGK KVL EDIVKCHVRSHMSSLVGS    +PE+R 
Sbjct: 119  SGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSI---NPESRK 175

Query: 871  AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETALRLVVSSLRTSEYRPINIFVNF 692
            AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETA+RLVVSSLRT EYRPIN+FVNF
Sbjct: 176  AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPINVFVNF 235

Query: 691  YSDPKYKFKVPRTDFFPQPNVDAAVVSFKLKPPSEYPQVXXXXXXXSMVNSAFNEKRKML 512
            YSDP+YK +VPRT+FFPQPNVDAAVVSFKLK PSEYPQV       SMVNSAFNEKRKML
Sbjct: 236  YSDPEYKLEVPRTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRKML 295

Query: 511  RKSLQHICSSLEIEEALKSIGLLTTSRPEELTLDDFVKLHNLITKE 374
            RKSLQHIC+SLEIEEAL SIGLL TSRPEELTLDDFVKLHNLI KE
Sbjct: 296  RKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAKE 341


>ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferase A [Medicago truncatula]
            gi|124360236|gb|ABN08249.1| SAM (and some other
            nucleotide) binding motif [Medicago truncatula]
            gi|124360864|gb|ABN08836.1| SAM (and some other
            nucleotide) binding motif [Medicago truncatula]
            gi|355498861|gb|AES80064.1| Ribosomal RNA small subunit
            methyltransferase A [Medicago truncatula]
          Length = 349

 Score =  524 bits (1350), Expect = e-146
 Identities = 279/345 (80%), Positives = 294/345 (85%), Gaps = 9/345 (2%)
 Frame = -3

Query: 1381 SQLCSLQTL---------NCRPKPPLPAQYSTAVARRRTVYVACGGGSSRASTRNTDDYH 1229
            S  C LQTL         N R KPP P +  T   R R  YVACG G++RAST N DDYH
Sbjct: 6    SHRCYLQTLPPISHNATFNSRHKPP-PPRNPTGDKRSRKFYVACGRGNNRASTTNKDDYH 64

Query: 1228 ATLKALNSKGRFPRKSLGQHYMLNSDINEQLAGVAGVEQGDVVLEIGPGTGSLTNVLINS 1049
            ATLKALNSKGR P+KSLGQ+YMLNSDINEQL GVAGVE+GDVVLEIGPGTGSLTN LINS
Sbjct: 65   ATLKALNSKGRSPKKSLGQNYMLNSDINEQLVGVAGVEEGDVVLEIGPGTGSLTNTLINS 124

Query: 1048 GAFVLAVEKDKHMAELVSERFSSTGKFKVLNEDIVKCHVRSHMSSLVGSTKQTDPETRSA 869
            GAFVLAVEKDKHMA LVSERFSSTGK KVLNEDIVKCHVRSH+SSLVGST+  D +TR A
Sbjct: 125  GAFVLAVEKDKHMAALVSERFSSTGKLKVLNEDIVKCHVRSHISSLVGSTEDIDSDTRKA 184

Query: 868  KVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETALRLVVSSLRTSEYRPINIFVNFY 689
            KVVANIPF ISTDVIKLLLPMGDIFSEVVLLLQEETALR V  SLRT EYRPINIFVNFY
Sbjct: 185  KVVANIPFYISTDVIKLLLPMGDIFSEVVLLLQEETALRWVEPSLRTPEYRPINIFVNFY 244

Query: 688  SDPKYKFKVPRTDFFPQPNVDAAVVSFKLKPPSEYPQVXXXXXXXSMVNSAFNEKRKMLR 509
            SDP+YKFKV RT+FFPQPNVDAAVVSFKLK PSEYPQV       SMVNSAFNEKRKM+R
Sbjct: 245  SDPEYKFKVARTNFFPQPNVDAAVVSFKLKQPSEYPQVSSNKSFFSMVNSAFNEKRKMIR 304

Query: 508  KSLQHICSSLEIEEALKSIGLLTTSRPEELTLDDFVKLHNLITKE 374
            KSLQHIC+SLEIEEAL+SIGLL+TSRPEELTLDDFVKLHN ITKE
Sbjct: 305  KSLQHICTSLEIEEALESIGLLSTSRPEELTLDDFVKLHNSITKE 349


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  521 bits (1343), Expect = e-145
 Identities = 279/346 (80%), Positives = 293/346 (84%), Gaps = 10/346 (2%)
 Frame = -3

Query: 1381 SQLCSLQTLNCRPKPPL----------PAQYSTAVARRRTVYVACGGGSSRASTRNTDDY 1232
            S LCSLQ       PP+          PA  STA  R RT YV     SS ASTR+ DDY
Sbjct: 4    SSLCSLQA-----SPPISHALLNRHHKPAHDSTAGVRNRTPYVVSSERSSTASTRSADDY 58

Query: 1231 HATLKALNSKGRFPRKSLGQHYMLNSDINEQLAGVAGVEQGDVVLEIGPGTGSLTNVLIN 1052
            HATLKALNSKGRFPRKSLGQHYMLN+DIN+QLAG AGVEQGDVVLEIGPGTGSLTNVL+N
Sbjct: 59   HATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVLLN 118

Query: 1051 SGAFVLAVEKDKHMAELVSERFSSTGKFKVLNEDIVKCHVRSHMSSLVGSTKQTDPETRS 872
            SGAFVLAVEKDKHMA LVSERFSSTGK KVL EDIVKCHVRSHMSSLVGS    +PE+R 
Sbjct: 119  SGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSI---NPESRK 175

Query: 871  AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETALRLVVSSLRTSEYRPINIFVNF 692
            AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETA+RLVVSSLRT EYRP+N+FVNF
Sbjct: 176  AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPVNVFVNF 235

Query: 691  YSDPKYKFKVPRTDFFPQPNVDAAVVSFKLKPPSEYPQVXXXXXXXSMVNSAFNEKRKML 512
            YSDP+YK KVPR++FFPQPNVDAAVVSFKLK PSEYPQV       SMVNSAFNEKRKML
Sbjct: 236  YSDPEYKLKVPRSNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRKML 295

Query: 511  RKSLQHICSSLEIEEALKSIGLLTTSRPEELTLDDFVKLHNLITKE 374
            RKSLQHIC+SLEIEEAL SIGLL TSRPEELTLDDFVKLHNLI KE
Sbjct: 296  RKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAKE 341


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Cucumis sativus]
          Length = 347

 Score =  438 bits (1127), Expect = e-120
 Identities = 229/319 (71%), Positives = 260/319 (81%), Gaps = 1/319 (0%)
 Frame = -3

Query: 1330 PAQYSTAVARRRTVYVACGGGSSRASTR-NTDDYHATLKALNSKGRFPRKSLGQHYMLNS 1154
            P   S   +R  T +V+C   S R     N DDYH+T++ALNSKGR PRKSLGQHYMLNS
Sbjct: 28   PPSTSVVGSRWATPFVSCSAASVRVGEGVNPDDYHSTIRALNSKGRVPRKSLGQHYMLNS 87

Query: 1153 DINEQLAGVAGVEQGDVVLEIGPGTGSLTNVLINSGAFVLAVEKDKHMAELVSERFSSTG 974
             INEQLA  A V++GDVVLEIGPGTGSLTNVLINSGA VLAVEKD +MA LV ERF++T 
Sbjct: 88   SINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAGLVDERFANTN 147

Query: 973  KFKVLNEDIVKCHVRSHMSSLVGSTKQTDPETRSAKVVANIPFNISTDVIKLLLPMGDIF 794
            + KVLNED VKC+V SHM SL+ S + ++  ++ AKVV+NIPFNISTD+IK LLPMGDIF
Sbjct: 148  RLKVLNEDFVKCNVSSHMMSLLKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIF 207

Query: 793  SEVVLLLQEETALRLVVSSLRTSEYRPINIFVNFYSDPKYKFKVPRTDFFPQPNVDAAVV 614
            SEVVLLLQEE ALRLV +SLRTSEYRPIN+FVNFYSDP+ KFKVPRT+FFPQPNVDAAVV
Sbjct: 208  SEVVLLLQEEAALRLVETSLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVV 267

Query: 613  SFKLKPPSEYPQVXXXXXXXSMVNSAFNEKRKMLRKSLQHICSSLEIEEALKSIGLLTTS 434
            SFKLK  ++YP V       SMVNSAFN KRKMLRKSLQHIC+SLEIE+AL+   LL TS
Sbjct: 268  SFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIEKALEDSSLLPTS 327

Query: 433  RPEELTLDDFVKLHNLITK 377
            RPEEL+LDDFVKLHNLI K
Sbjct: 328  RPEELSLDDFVKLHNLIVK 346


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
            gi|223548969|gb|EEF50458.1| dimethyladenosine
            transferase, putative [Ricinus communis]
          Length = 338

 Score =  435 bits (1118), Expect = e-119
 Identities = 223/333 (66%), Positives = 265/333 (79%)
 Frame = -3

Query: 1375 LCSLQTLNCRPKPPLPAQYSTAVARRRTVYVACGGGSSRASTRNTDDYHATLKALNSKGR 1196
            L S+ TL  R KP +P++     AR++ V + C       + R++DDY ATLKALNS+GR
Sbjct: 11   LASIPTLTVRAKPSVPSRNGITSARKKRVLIRCD------TKRSSDDYRATLKALNSRGR 64

Query: 1195 FPRKSLGQHYMLNSDINEQLAGVAGVEQGDVVLEIGPGTGSLTNVLINSGAFVLAVEKDK 1016
             PRKSLGQHYMLNS++NEQL   A VE+GD+VLEIGPGTGSLTN+L+++GA VLA+EKD 
Sbjct: 65   RPRKSLGQHYMLNSEVNEQLVCAANVEEGDLVLEIGPGTGSLTNLLLDTGATVLAIEKDA 124

Query: 1015 HMAELVSERFSSTGKFKVLNEDIVKCHVRSHMSSLVGSTKQTDPETRSAKVVANIPFNIS 836
            HMA +V ERFS T +FK+L ED VKCH+R HM SL+ +    + + R AKVVANIPFNIS
Sbjct: 125  HMAAIVRERFSHTDRFKLLQEDFVKCHIRFHMLSLLENMTSLNEKPRRAKVVANIPFNIS 184

Query: 835  TDVIKLLLPMGDIFSEVVLLLQEETALRLVVSSLRTSEYRPINIFVNFYSDPKYKFKVPR 656
            TDV+K LLPMGDI SEV LLLQEETA RLV SSLRTSEYRPIN+FVNFYSDP YKFKVPR
Sbjct: 185  TDVVKQLLPMGDIISEVALLLQEETASRLVESSLRTSEYRPINVFVNFYSDPVYKFKVPR 244

Query: 655  TDFFPQPNVDAAVVSFKLKPPSEYPQVXXXXXXXSMVNSAFNEKRKMLRKSLQHICSSLE 476
            ++FFPQPNVDAAVV+FKLK  ++YP V       S+VNSAFN KRKMLR+SLQHIC+S E
Sbjct: 245  SNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVNSAFNGKRKMLRRSLQHICTSPE 304

Query: 475  IEEALKSIGLLTTSRPEELTLDDFVKLHNLITK 377
            IE+AL ++GL  TSRPEELTLDDFVKLHNLI +
Sbjct: 305  IEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337