BLASTX nr result

ID: Glycyrrhiza24_contig00024903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024903
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   134   1e-29
gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]       132   3e-29
emb|CBI34712.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   132   3e-29
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...   131   5e-29

>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  134 bits (336), Expect = 1e-29
 Identities = 80/136 (58%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
 Frame = -3

Query: 402 MLAGCSSSTLLSPRHRLRSESPAQFQATCHFQLPSMNTQRLDLPCSFPRKDTSTRSQQPL 223
           MLAGCSSSTLLSPRHRLRSESPAQFQA CHFQLPSM+TQRLDLPC+F RK++S    QP+
Sbjct: 1   MLAGCSSSTLLSPRHRLRSESPAQFQA-CHFQLPSMSTQRLDLPCTFSRKESS--RSQPI 57

Query: 222 RPVGI--SVEKPLEAANKNNNNTTCSLKQNIRXXXXXXXXXXXXXXXXLGGENIKDEELF 49
           RPVG+  SV+KPLE     +  ++CSLKQNIR                   +++KDE  F
Sbjct: 58  RPVGVGLSVDKPLE-----SKTSSCSLKQNIR-----------LPPLATSNQSVKDE--F 99

Query: 48  WGEKKDGKSLKRLAEE 1
           W   + GKSLKR AE+
Sbjct: 100 W---EKGKSLKRFAEQ 112


>gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 503

 Score =  132 bits (332), Expect = 3e-29
 Identities = 79/133 (59%), Positives = 90/133 (67%)
 Frame = -3

Query: 402 MLAGCSSSTLLSPRHRLRSESPAQFQATCHFQLPSMNTQRLDLPCSFPRKDTSTRSQQPL 223
           MLAGCSSSTLLSPRHRLRSE+PAQFQA CHFQLPSM+TQRLDLPCSF RK++S    QP+
Sbjct: 1   MLAGCSSSTLLSPRHRLRSEAPAQFQA-CHFQLPSMSTQRLDLPCSFSRKESS--RSQPI 57

Query: 222 RPVGISVEKPLEAANKNNNNTTCSLKQNIRXXXXXXXXXXXXXXXXLGGENIKDEELFWG 43
           RPVG+SVEK +E        ++CSLKQNIR                     +KDE  FW 
Sbjct: 58  RPVGLSVEKAIEP-----KTSSCSLKQNIRLPPLATSTQ----------REVKDE--FW- 99

Query: 42  EKKDGKSLKRLAE 4
             + GKSLKR AE
Sbjct: 100 --EKGKSLKRFAE 110


>emb|CBI34712.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  132 bits (332), Expect = 3e-29
 Identities = 82/134 (61%), Positives = 90/134 (67%)
 Frame = -3

Query: 402 MLAGCSSSTLLSPRHRLRSESPAQFQATCHFQLPSMNTQRLDLPCSFPRKDTSTRSQQPL 223
           MLAGCS  TLLSPRHRLRSE+ AQFQA CHFQLPSM+TQRLDLPCSFPRKD S    QP+
Sbjct: 1   MLAGCS--TLLSPRHRLRSETSAQFQA-CHFQLPSMSTQRLDLPCSFPRKDAS--RSQPI 55

Query: 222 RPVGISVEKPLEAANKNNNNTTCSLKQNIRXXXXXXXXXXXXXXXXLGGENIKDEELFWG 43
           RPVG+SVEK +EA       +TCSLKQNIR                 G   IKDE  FW 
Sbjct: 56  RPVGLSVEKSMEA-----KTSTCSLKQNIR---LPPSATSAQTTFIEGRREIKDE--FW- 104

Query: 42  EKKDGKSLKRLAEE 1
             + GKSLKR AE+
Sbjct: 105 --EKGKSLKRFAEQ 116


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  132 bits (332), Expect = 3e-29
 Identities = 82/134 (61%), Positives = 90/134 (67%)
 Frame = -3

Query: 402 MLAGCSSSTLLSPRHRLRSESPAQFQATCHFQLPSMNTQRLDLPCSFPRKDTSTRSQQPL 223
           MLAGCS  TLLSPRHRLRSE+ AQFQA CHFQLPSM+TQRLDLPCSFPRKD S    QP+
Sbjct: 1   MLAGCS--TLLSPRHRLRSETSAQFQA-CHFQLPSMSTQRLDLPCSFPRKDAS--RSQPI 55

Query: 222 RPVGISVEKPLEAANKNNNNTTCSLKQNIRXXXXXXXXXXXXXXXXLGGENIKDEELFWG 43
           RPVG+SVEK +EA       +TCSLKQNIR                 G   IKDE  FW 
Sbjct: 56  RPVGLSVEKSMEA-----KTSTCSLKQNIR---LPPSATSAQTTFIEGRREIKDE--FW- 104

Query: 42  EKKDGKSLKRLAEE 1
             + GKSLKR AE+
Sbjct: 105 --EKGKSLKRFAEQ 116


>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 662

 Score =  131 bits (330), Expect = 5e-29
 Identities = 80/136 (58%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
 Frame = -3

Query: 402 MLAGCSSSTLLSPRHRLRSESPAQFQATCHFQLPSMNTQRLDLPCSFPRKDTSTRSQQPL 223
           MLAGCSSS+LLSPRHRLRSESPAQFQA CHFQLPSM+TQRLDLPC+F RK++S    QP+
Sbjct: 1   MLAGCSSSSLLSPRHRLRSESPAQFQA-CHFQLPSMSTQRLDLPCTFSRKESS--RSQPI 57

Query: 222 RPVGI--SVEKPLEAANKNNNNTTCSLKQNIRXXXXXXXXXXXXXXXXLGGENIKDEELF 49
           RPVG+  SV+K LE     +  TTCSLKQNIR                   +++KDE  F
Sbjct: 58  RPVGVGLSVDKSLE-----SKTTTCSLKQNIR-----------LPPLATSTQSVKDE--F 99

Query: 48  WGEKKDGKSLKRLAEE 1
           W   + GKSLKR AE+
Sbjct: 100 W---EKGKSLKRFAEQ 112


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