BLASTX nr result

ID: Glycyrrhiza24_contig00024876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024876
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   370   e-100
ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   263   2e-68
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              263   2e-68
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   261   9e-68
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   259   6e-67

>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
           gi|355498406|gb|AES79609.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 906

 Score =  370 bits (949), Expect = e-100
 Identities = 196/250 (78%), Positives = 218/250 (87%)
 Frame = -1

Query: 751 NEVFAKLCSMARDMSMKVRVEAFNGLGKVKIVSEDFLMQSLSKRVLGSGKQRETLDESTS 572
           N+VFAKLCSMARDMSMKVRVEAFNGL K++IVS+DFL+QSLSK+VLG+GKQ+ETLD+STS
Sbjct: 209 NDVFAKLCSMARDMSMKVRVEAFNGLAKMEIVSKDFLLQSLSKKVLGNGKQKETLDQSTS 268

Query: 571 EQFVTLASSVAGALVHGLEDEFFEVRRSACQSLCTLTILSVKFAREAXXXXXXXXXXDSV 392
           EQF  LAS+VAGALVHGLEDEFFEVR+SACQSL  LTILSV+FARE           DS+
Sbjct: 269 EQFAKLASNVAGALVHGLEDEFFEVRKSACQSLHRLTILSVEFARETLDLLMDMLNDDSM 328

Query: 391 VVRLQALETMHNMAINGCPKIQEKHLHMFLGALVDNSRTVRYAARKILKILKLNDLAMFK 212
           VVRLQ LETMH MAIN C K+QEKHLHMFLGAL+DNSR VR A RKILKI+KLN+LAMFK
Sbjct: 329 VVRLQTLETMHRMAINSCLKLQEKHLHMFLGALLDNSREVRCAERKILKIVKLNNLAMFK 388

Query: 211 SSIDVLLENLDSYPQDEADVFSAFSHLGRSHKKFVGLIIKETFEEVEAAFEGNVEFNSAR 32
           SSID LLENLD Y QDEADVFS  S+LGR+HKKFV  IIKETFEEVEA+F+GNVEF S R
Sbjct: 389 SSIDRLLENLDRYAQDEADVFSVCSNLGRNHKKFVCSIIKETFEEVEASFDGNVEFKSGR 448

Query: 31  IAALLILSIS 2
           IAALLI+SIS
Sbjct: 449 IAALLIISIS 458


>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  263 bits (673), Expect = 2e-68
 Identities = 144/258 (55%), Positives = 185/258 (71%), Gaps = 10/258 (3%)
 Frame = -1

Query: 745  VFAKLCSMARDMSMKVRVEAFNGLGKVKIVSEDFLMQSLSKRVLGSGKQRETLDESTSEQ 566
            VF +LCSM RDMSM+VRV AF+ LGK+ +VSED L+Q+LSKRVLG  K+++ L + ++++
Sbjct: 247  VFVRLCSMVRDMSMEVRVAAFDALGKIGVVSEDILLQTLSKRVLGITKEKKPLGQCSAKR 306

Query: 565  ----------FVTLASSVAGALVHGLEDEFFEVRRSACQSLCTLTILSVKFAREAXXXXX 416
                      F   A   AGA VHGLEDEF+EVR SAC SL TLTILS KFA EA     
Sbjct: 307  KSLGQYIPKHFDIQACVAAGAFVHGLEDEFYEVRWSACHSLHTLTILSAKFAGEALNLLM 366

Query: 415  XXXXXDSVVVRLQALETMHNMAINGCPKIQEKHLHMFLGALVDNSRTVRYAARKILKILK 236
                 DS+ VRL+ALETMH+MA     K+QE H+HMFLG LVDNS  +R  ARKIL+++K
Sbjct: 367  DVLNDDSLNVRLRALETMHHMATCDHLKVQETHMHMFLGTLVDNSTFIRSTARKILRLMK 426

Query: 235  LNDLAMFKSSIDVLLENLDSYPQDEADVFSAFSHLGRSHKKFVGLIIKETFEEVEAAFEG 56
            L+DL MF+SSID LLENL+ YPQDEAD+ S    +GR+H  FV  IIK+  +E+E + EG
Sbjct: 427  LHDLKMFQSSIDGLLENLEVYPQDEADILSVLFDIGRNHGNFVVCIIKKFSQEIEPSCEG 486

Query: 55   NVEFNSARIAALLILSIS 2
             ++F+S R+AALL+L+IS
Sbjct: 487  RLDFDSVRVAALLVLAIS 504


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  263 bits (673), Expect = 2e-68
 Identities = 144/258 (55%), Positives = 185/258 (71%), Gaps = 10/258 (3%)
 Frame = -1

Query: 745  VFAKLCSMARDMSMKVRVEAFNGLGKVKIVSEDFLMQSLSKRVLGSGKQRETLDESTSEQ 566
            VF +LCSM RDMSM+VRV AF+ LGK+ +VSED L+Q+LSKRVLG  K+++ L + ++++
Sbjct: 247  VFVRLCSMVRDMSMEVRVAAFDALGKIGVVSEDILLQTLSKRVLGITKEKKPLGQCSAKR 306

Query: 565  ----------FVTLASSVAGALVHGLEDEFFEVRRSACQSLCTLTILSVKFAREAXXXXX 416
                      F   A   AGA VHGLEDEF+EVR SAC SL TLTILS KFA EA     
Sbjct: 307  KSLGQYIPKHFDIQACVAAGAFVHGLEDEFYEVRWSACHSLHTLTILSAKFAGEALNLLM 366

Query: 415  XXXXXDSVVVRLQALETMHNMAINGCPKIQEKHLHMFLGALVDNSRTVRYAARKILKILK 236
                 DS+ VRL+ALETMH+MA     K+QE H+HMFLG LVDNS  +R  ARKIL+++K
Sbjct: 367  DVLNDDSLNVRLRALETMHHMATCDHLKVQETHMHMFLGTLVDNSTFIRSTARKILRLMK 426

Query: 235  LNDLAMFKSSIDVLLENLDSYPQDEADVFSAFSHLGRSHKKFVGLIIKETFEEVEAAFEG 56
            L+DL MF+SSID LLENL+ YPQDEAD+ S    +GR+H  FV  IIK+  +E+E + EG
Sbjct: 427  LHDLKMFQSSIDGLLENLEVYPQDEADILSVLFDIGRNHGNFVVCIIKKFSQEIEPSCEG 486

Query: 55   NVEFNSARIAALLILSIS 2
             ++F+S R+AALL+L+IS
Sbjct: 487  RLDFDSVRVAALLVLAIS 504


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  261 bits (668), Expect = 9e-68
 Identities = 134/250 (53%), Positives = 180/250 (72%)
 Frame = -1

Query: 751 NEVFAKLCSMARDMSMKVRVEAFNGLGKVKIVSEDFLMQSLSKRVLGSGKQRETLDESTS 572
           N+VF +LCSM RDMS++VRVEAFN LGK+K+VSED L+Q++SK+VL   K++ +  + T+
Sbjct: 241 NQVFVQLCSMVRDMSVEVRVEAFNALGKIKLVSEDILLQTISKKVLAIMKEKNSHGQCTA 300

Query: 571 EQFVTLASSVAGALVHGLEDEFFEVRRSACQSLCTLTILSVKFAREAXXXXXXXXXXDSV 392
           E+F  LASS AGA VHGLEDEF EVR+SAC SL   TIL  +FAR +          DS+
Sbjct: 301 ERFEILASSYAGAFVHGLEDEFHEVRKSACNSLRIHTILYAEFARRSLSLLMDMLNDDSM 360

Query: 391 VVRLQALETMHNMAINGCPKIQEKHLHMFLGALVDNSRTVRYAARKILKILKLNDLAMFK 212
            VRL+ALET+H+MA   C  +QE H+HMFLG+L+DN   +R  ARKI K++KL+D  +F+
Sbjct: 361 AVRLEALETLHHMATFECLHVQEIHMHMFLGSLLDNCDLIRSIARKIFKLVKLSDFKLFR 420

Query: 211 SSIDVLLENLDSYPQDEADVFSAFSHLGRSHKKFVGLIIKETFEEVEAAFEGNVEFNSAR 32
           SSI  LL+NL+ Y +DEADVFS    +GRSH  F   ++KE  +E+E   EG +  +SAR
Sbjct: 421 SSIHGLLQNLERYTKDEADVFSVLFFMGRSHGNFAARVVKEVSQEIEPVLEGKLVLDSAR 480

Query: 31  IAALLILSIS 2
           +AA L+L+IS
Sbjct: 481 VAAFLVLAIS 490


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score =  259 bits (661), Expect = 6e-67
 Identities = 135/248 (54%), Positives = 179/248 (72%)
 Frame = -1

Query: 745 VFAKLCSMARDMSMKVRVEAFNGLGKVKIVSEDFLMQSLSKRVLGSGKQRETLDESTSEQ 566
           VF +LCSM RDMSM VRV AF+ LGK++IVSED L+Q+LSK+VL   K++++     +E+
Sbjct: 231 VFLQLCSMVRDMSMGVRVGAFSALGKIQIVSEDILLQTLSKKVLPIIKEKKS---QIAER 287

Query: 565 FVTLASSVAGALVHGLEDEFFEVRRSACQSLCTLTILSVKFAREAXXXXXXXXXXDSVVV 386
           F +LA+S AGA +HGLEDEF+EVR+SAC SL  L ILS +FA  A           S+VV
Sbjct: 288 FQSLAASAAGAFMHGLEDEFYEVRKSACYSLRKLVILSAEFAGRALNLLIDLLNDSSLVV 347

Query: 385 RLQALETMHNMAINGCPKIQEKHLHMFLGALVDNSRTVRYAARKILKILKLNDLAMFKSS 206
           RL+AL T+H+MA + C  +QE H+HMFLG L+DN+  +R AARK+ K +KL  + +F+ S
Sbjct: 348 RLEALGTLHHMAASDCLNVQEMHMHMFLGTLIDNNDIIRTAARKVYKYVKLPSMELFRLS 407

Query: 205 IDVLLENLDSYPQDEADVFSAFSHLGRSHKKFVGLIIKETFEEVEAAFEGNVEFNSARIA 26
           ID LL NLD YPQDEADVFS   ++GRSHK F   IIKE ++E+E    GN+  +SAR+A
Sbjct: 408 IDGLLGNLDIYPQDEADVFSVLFYMGRSHKDFTTSIIKEAYQEIEPVSNGNMSLDSARVA 467

Query: 25  ALLILSIS 2
           A L+L+IS
Sbjct: 468 AFLVLAIS 475


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