BLASTX nr result

ID: Glycyrrhiza24_contig00024846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024846
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago ...    64   2e-08

>ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula]
           gi|355514182|gb|AES95805.1| E3 ubiquitin-protein ligase
           RNF14 [Medicago truncatula]
          Length = 630

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
 Frame = -2

Query: 481 NSASSNMRGARRKQHRHESSVTARXXXXXXXXXXXXXQHSAKLKYRYVNKXXXXXXXXXS 302
           NS  SNM G   + HR++S                  QH  K K RYVNK          
Sbjct: 13  NSIPSNMSG---RYHRNKSQ----------------QQHRTKSKLRYVNKSELIVSSP-- 51

Query: 301 NNPVAVEQVHPEDDVVVVDATRRNHEKHNTEDFIGNTNAVVDESE---TRNNVAGSSEVK 131
            N VAVEQ    +DV+V       +  +NT D + +++    + E     N++    +  
Sbjct: 52  -NSVAVEQPVSSEDVIV-------NNNNNTVDDVASSSKTKTKEEYDYDNNDIDNGMD-- 101

Query: 130 XXXXXXXXXIMGRLDKLLSDIREPQLSEEQIAFNDQLQQDELL 2
                       RLDKLL+DI++ +LSEE+I  NDQLQQDELL
Sbjct: 102 ---------NTNRLDKLLTDIQQIELSEEEITINDQLQQDELL 135


Top