BLASTX nr result

ID: Glycyrrhiza24_contig00024839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024839
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   120   1e-25
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   120   1e-25
ref|XP_003612586.1| Transcription initiation factor TFIID subuni...    95   5e-18
ref|XP_002522626.1| transcription initiation factor tfiid, putat...    93   3e-17
ref|XP_004168436.1| PREDICTED: uncharacterized protein LOC101224...    89   4e-16

>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1910

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/69 (85%), Positives = 59/69 (85%)
 Frame = +1

Query: 124 MGYDSDSPSQDGRXXXXXXXXXXSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 303
           MGYDSDSPSQDGR          SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
Sbjct: 1   MGYDSDSPSQDGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 60

Query: 304 ADKLGPSLT 330
           ADKLGPSLT
Sbjct: 61  ADKLGPSLT 69


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1919

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/69 (85%), Positives = 59/69 (85%)
 Frame = +1

Query: 124 MGYDSDSPSQDGRXXXXXXXXXXSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 303
           MGYDSDSPSQDGR          SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
Sbjct: 1   MGYDSDSPSQDGRDEDDEEEYEESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 60

Query: 304 ADKLGPSLT 330
           ADKLGPSLT
Sbjct: 61  ADKLGPSLT 69


>ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
           truncatula] gi|355513921|gb|AES95544.1| Transcription
           initiation factor TFIID subunit 1-A [Medicago
           truncatula]
          Length = 2196

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/46 (97%), Positives = 45/46 (97%)
 Frame = +1

Query: 193 SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLT 330
           SGKGN FLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLT
Sbjct: 120 SGKGNHFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLT 165


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223538102|gb|EEF39713.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/67 (70%), Positives = 50/67 (74%)
 Frame = +1

Query: 130 YDSDSPSQDGRXXXXXXXXXXSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALAD 309
           Y+S S SQD R           G G+R LGFMFGNVDNSGDLDVDYLDEDAKEHL+ALAD
Sbjct: 4   YESGSASQDCRDEDDEEEYEEGGGGSRLLGFMFGNVDNSGDLDVDYLDEDAKEHLAALAD 63

Query: 310 KLGPSLT 330
           KLG SLT
Sbjct: 64  KLGSSLT 70


>ref|XP_004168436.1| PREDICTED: uncharacterized protein LOC101224132 [Cucumis sativus]
          Length = 129

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +1

Query: 193 SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLT 330
           +G GNRFLGFMFGNVDNSGDLD DYLDEDAKEHL ALADKLGP+LT
Sbjct: 23  AGGGNRFLGFMFGNVDNSGDLDADYLDEDAKEHLDALADKLGPTLT 68


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