BLASTX nr result

ID: Glycyrrhiza24_contig00024824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024824
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat...   138   5e-31
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   127   1e-27
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   124   8e-27
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   120   1e-25

>ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = -2

Query: 248 KAQKDPLKALEMFNSAKNEDGFKHTLFTYKCMLQKLGLHGDFSEMEKLLSEMRSNLDNSL 69
           K Q DPLKALEMFNSAK+EDGFKHT  TYKC++QKLG HG+F EMEKLLSEMR N++N+L
Sbjct: 15  KIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNAL 74

Query: 68  LEGAYVEAMRHYGRKGKVQEAV 3
           LEGAY+EAM++YGRKGKVQEAV
Sbjct: 75  LEGAYIEAMKNYGRKGKVQEAV 96


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 KAQKDPLKALEMFNSAKNEDGFKHTLFTYKCMLQKLGLHGDFSEMEKLLSEMRSNLDNSL 69
           K QKDPLKAL +FNS K EDGFKHT  TYK M++KLG HG+F  ME++L EMR N+DNSL
Sbjct: 15  KYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSL 74

Query: 68  LEGAYVEAMRHYGRKGKVQEAV 3
           LEG YV AMR+YGRKGKVQEAV
Sbjct: 75  LEGVYVSAMRNYGRKGKVQEAV 96


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 KAQKDPLKALEMFNSAKNEDGFKHTLFTYKCMLQKLGLHGDFSEMEKLLSEMRSNLDNSL 69
           K QKDPLKALEMFN  K EDGFKH+L TYKC++QKLG HG+F  ME +L+E R ++DNSL
Sbjct: 15  KQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSL 74

Query: 68  LEGAYVEAMRHYGRKGKVQEAV 3
           LEG Y+ AM+ YGRKGKVQEAV
Sbjct: 75  LEGVYIGAMKSYGRKGKVQEAV 96


>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/82 (69%), Positives = 69/82 (84%)
 Frame = -2

Query: 248 KAQKDPLKALEMFNSAKNEDGFKHTLFTYKCMLQKLGLHGDFSEMEKLLSEMRSNLDNSL 69
           K QK+PLKALE+FNS K EDGFKHTL TYK M++KLG HG+F  ME++L+E R N+DN L
Sbjct: 15  KYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGL 74

Query: 68  LEGAYVEAMRHYGRKGKVQEAV 3
           LEG Y+ AMR+YGRKGK+QEAV
Sbjct: 75  LEGVYIGAMRNYGRKGKIQEAV 96


>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 64/80 (80%)
 Frame = -2

Query: 242 QKDPLKALEMFNSAKNEDGFKHTLFTYKCMLQKLGLHGDFSEMEKLLSEMRSNLDNSLLE 63
           Q DPL AL+MFN  K EDGFKHTL TYKCM++KLGLHG F  ME +L+EMR N+D+ +LE
Sbjct: 17  QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76

Query: 62  GAYVEAMRHYGRKGKVQEAV 3
           G Y+  MR YGRKGKVQEAV
Sbjct: 77  GVYIGIMRDYGRKGKVQEAV 96


Top