BLASTX nr result
ID: Glycyrrhiza24_contig00024822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00024822
(1034 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 582 e-164
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t... 563 e-158
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 460 e-127
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 459 e-127
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 459 e-127
>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
Length = 1600
Score = 582 bits (1499), Expect = e-164
Identities = 292/335 (87%), Positives = 308/335 (91%)
Frame = +1
Query: 1 RAHDEIKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYL 180
RAHDEIKMAVSRLHLRANEDDKSLDALGENEL+AASSNFSHDKFMS +LSQIKGKLRYL
Sbjct: 1189 RAHDEIKMAVSRLHLRANEDDKSLDALGENELAAASSNFSHDKFMSLTMLSQIKGKLRYL 1248
Query: 181 KGLVQSKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVF 360
KGLVQSKQKL ESP SSSFT+ETTA NSTEEK L+SK+D+ETCP+CQEKLG Q+MVF
Sbjct: 1249 KGLVQSKQKLQFESPTSSSFTRETTATPNSTEEKDALLSKSDDETCPICQEKLGKQKMVF 1308
Query: 361 QCGHVTCCKCLFAMTEQRLQHSKIHNWVMCPTCRQHTDFGNIAYAVDAQNESSNSSMLHT 540
QCGHVTCCKCLFAMTE+RLQ+SK+HNWVMCPTCRQHTDFGNIAYAVDAQ+ESS+ S+LH
Sbjct: 1309 QCGHVTCCKCLFAMTEKRLQNSKLHNWVMCPTCRQHTDFGNIAYAVDAQHESSDPSVLHP 1368
Query: 541 IDGCEKYEASISVKGSYGTKIEAVTRRILWIKATDHEAKVLVFSSWNDVLDVLEHAFAAN 720
ID EK+EASISVKGSYGTKIEAVTRRILW+KA DH AKVLVFSSWNDVLDVLEHAFAAN
Sbjct: 1369 IDSSEKFEASISVKGSYGTKIEAVTRRILWVKANDHRAKVLVFSSWNDVLDVLEHAFAAN 1428
Query: 721 NITYIRMKGGRKAHIAISQFRGKQNGTKGGESSAPKSIQVLLLLIQHGANGLNLLEAQHV 900
NITYIRMKGG SQFRGKQNGTK E S PKSIQVLLLLIQHGANGLNLLEAQHV
Sbjct: 1429 NITYIRMKGG-------SQFRGKQNGTKKCEGSTPKSIQVLLLLIQHGANGLNLLEAQHV 1481
Query: 901 VLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1005
VLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV
Sbjct: 1482 VLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1516
>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
gi|355516770|gb|AES98393.1| ATP-dependent helicase,
putative [Medicago truncatula]
Length = 1764
Score = 563 bits (1452), Expect = e-158
Identities = 289/366 (78%), Positives = 308/366 (84%), Gaps = 31/366 (8%)
Frame = +1
Query: 1 RAHDEIKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYL 180
RAHDEIKMAVSRLHLR NEDDKSLDALGENEL AASSNFS +KFMS ALLSQIKGKLRYL
Sbjct: 1314 RAHDEIKMAVSRLHLRENEDDKSLDALGENELYAASSNFSQEKFMSLALLSQIKGKLRYL 1373
Query: 181 KGLVQSKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVF 360
KGLVQSKQKLP ESPD+SS TQ+T +MSNSTEEKG LI KT EE+CP+CQEKLG++RMVF
Sbjct: 1374 KGLVQSKQKLPSESPDNSSCTQDTNSMSNSTEEKGELIPKTYEESCPICQEKLGHKRMVF 1433
Query: 361 QCGHVTCCKCLFAMTEQRLQHSKIHNWVMCPTCRQHTDFGNIAYAVDAQNESSNSSMLHT 540
QCGHVTCCKCL AMTE+RL+HSK H WVMCPTCRQHTD+ NIAYAVDAQ ES NSSMLHT
Sbjct: 1434 QCGHVTCCKCLVAMTEKRLKHSKTHTWVMCPTCRQHTDYRNIAYAVDAQKESPNSSMLHT 1493
Query: 541 IDGCEKYEASISVKGSYGTK-------------------------------IEAVTRRIL 627
ID CEK+EASI+V+GSYGTK IEAVTRRIL
Sbjct: 1494 IDNCEKHEASITVEGSYGTKESPNSSMLHTTDNCEKHEASITVEGSYGTKIIEAVTRRIL 1553
Query: 628 WIKATDHEAKVLVFSSWNDVLDVLEHAFAANNITYIRMKGGRKAHIAISQFRGKQNGTKG 807
WIKAT+H +KVLVFSSWNDVLDVLEHAFA NNIT++RMKGGRKAH AISQFRG QNGTKG
Sbjct: 1554 WIKATNHNSKVLVFSSWNDVLDVLEHAFATNNITFVRMKGGRKAHTAISQFRGIQNGTKG 1613
Query: 808 GESSAPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTL 987
E P SIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQK KTL
Sbjct: 1614 CEGEEPISIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKQKTL 1673
Query: 988 IHRFIV 1005
IHRF+V
Sbjct: 1674 IHRFLV 1679
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 460 bits (1183), Expect = e-127
Identities = 238/346 (68%), Positives = 279/346 (80%), Gaps = 11/346 (3%)
Frame = +1
Query: 1 RAHDEIKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYL 180
RAHDEIKMA SRL LR +E+DKS+DAL NEL AA S ++ MS LLS+IKG+LRYL
Sbjct: 1989 RAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLSRIKGQLRYL 2048
Query: 181 KGLVQSKQKLPLESPDSSSFTQETTAM--SNSTEEKGVLISKTDEETCPVCQEKLGNQRM 354
KGLV SKQKL LESP+++S TQ+T + S EEK I +TD+E CPVCQEKL N+RM
Sbjct: 2049 KGLVLSKQKLQLESPNNASLTQDTATLLISXPVEEKNKCIRETDDEACPVCQEKLSNRRM 2108
Query: 355 VFQCGHVTCCKCLFAMTEQRL-QHSKIHN-WVMCPTCRQHTDFGNIAYAVDAQNESSNSS 528
VFQCGHV CC CLFAMTE+RL H K + W+MCPTCRQHTD GNIAYA D Q +S +S+
Sbjct: 2109 VFQCGHVICCNCLFAMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSA 2168
Query: 529 MLHTIDGCEKYEASISVKGSYGTKIEAVTRRILWIKATDHEAKVLVFSSWNDVLDVLEHA 708
LHT+ EK EAS+ V+GSYGTKIEAVTRRILWIK T+ +AK+LVFSSWNDVL+VLEHA
Sbjct: 2169 ELHTVQSXEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSSWNDVLNVLEHA 2228
Query: 709 FAANNITYIRMKGGRKAHIAISQFRGKQNGTKG-GESSA------PKSIQVLLLLIQHGA 867
ANNITY+RMKGGRK+H+AIS FR ++ +G G++ A P+ +QVLLLLIQHGA
Sbjct: 2229 LNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGA 2288
Query: 868 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1005
NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQ+N+TL+HRFIV
Sbjct: 2289 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIV 2334
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 459 bits (1181), Expect = e-127
Identities = 238/346 (68%), Positives = 279/346 (80%), Gaps = 11/346 (3%)
Frame = +1
Query: 1 RAHDEIKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYL 180
RAHDEIKMA SRL LR +E+DKS+DAL NEL AA S ++ MS LLS+IKG+LRYL
Sbjct: 1265 RAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLSRIKGQLRYL 1324
Query: 181 KGLVQSKQKLPLESPDSSSFTQETTAM--SNSTEEKGVLISKTDEETCPVCQEKLGNQRM 354
KGLV SKQKL LESP+++S TQ+T + S EEK I +TD+E CPVCQEKL N+RM
Sbjct: 1325 KGLVLSKQKLQLESPNNASLTQDTATLLISCPVEEKNKCIRETDDEACPVCQEKLSNRRM 1384
Query: 355 VFQCGHVTCCKCLFAMTEQRL-QHSKIHN-WVMCPTCRQHTDFGNIAYAVDAQNESSNSS 528
VFQCGHV CC CLFAMTE+RL H K + W+MCPTCRQHTD GNIAYA D Q +S +S+
Sbjct: 1385 VFQCGHVICCNCLFAMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSA 1444
Query: 529 MLHTIDGCEKYEASISVKGSYGTKIEAVTRRILWIKATDHEAKVLVFSSWNDVLDVLEHA 708
LHT+ EK EAS+ V+GSYGTKIEAVTRRILWIK T+ +AK+LVFSSWNDVL+VLEHA
Sbjct: 1445 ELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSSWNDVLNVLEHA 1504
Query: 709 FAANNITYIRMKGGRKAHIAISQFRGKQNGTKG-GESSA------PKSIQVLLLLIQHGA 867
ANNITY+RMKGGRK+H+AIS FR ++ +G G++ A P+ +QVLLLLIQHGA
Sbjct: 1505 LNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGA 1564
Query: 868 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1005
NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQ+N+TL+HRFIV
Sbjct: 1565 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIV 1610
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 459 bits (1181), Expect = e-127
Identities = 238/346 (68%), Positives = 279/346 (80%), Gaps = 11/346 (3%)
Frame = +1
Query: 1 RAHDEIKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYL 180
RAHDEIKMA SRL LR +E+DKS+DAL NEL AA S ++ MS LLS+IKG+LRYL
Sbjct: 1290 RAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLSRIKGQLRYL 1349
Query: 181 KGLVQSKQKLPLESPDSSSFTQETTAM--SNSTEEKGVLISKTDEETCPVCQEKLGNQRM 354
KGLV SKQKL LESP+++S TQ+T + S EEK I +TD+E CPVCQEKL N+RM
Sbjct: 1350 KGLVLSKQKLQLESPNNASLTQDTATLLISCPVEEKNKCIRETDDEACPVCQEKLSNRRM 1409
Query: 355 VFQCGHVTCCKCLFAMTEQRL-QHSKIHN-WVMCPTCRQHTDFGNIAYAVDAQNESSNSS 528
VFQCGHV CC CLFAMTE+RL H K + W+MCPTCRQHTD GNIAYA D Q +S +S+
Sbjct: 1410 VFQCGHVICCNCLFAMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSA 1469
Query: 529 MLHTIDGCEKYEASISVKGSYGTKIEAVTRRILWIKATDHEAKVLVFSSWNDVLDVLEHA 708
LHT+ EK EAS+ V+GSYGTKIEAVTRRILWIK T+ +AK+LVFSSWNDVL+VLEHA
Sbjct: 1470 ELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSSWNDVLNVLEHA 1529
Query: 709 FAANNITYIRMKGGRKAHIAISQFRGKQNGTKG-GESSA------PKSIQVLLLLIQHGA 867
ANNITY+RMKGGRK+H+AIS FR ++ +G G++ A P+ +QVLLLLIQHGA
Sbjct: 1530 LNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGA 1589
Query: 868 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1005
NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQ+N+TL+HRFIV
Sbjct: 1590 NGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIV 1635