BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024804
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                    65   4e-09
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...    65   4e-09
gb|ABD28496.1| Polynucleotidyl transferase, Ribonuclease H fold ...    60   2e-07
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    57   2e-06
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    55   6e-06

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = +1

Query: 22   LNVDGNSIGNPRLARFGGLLRTHDGE*NFGFYGLIGHSDNLKAELAVVCFGLRQAWEHGS 201
            LNVDG  + NPR A +GGL R  DG    GFYG +G +  +KAEL  +C GL  AW+ G 
Sbjct: 1185 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFGY 1244

Query: 202  RHLVCYSD 225
            R+++  +D
Sbjct: 1245 RNILVETD 1252


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = +1

Query: 22   LNVDGNSIGNPRLARFGGLLRTHDGE*NFGFYGLIGHSDNLKAELAVVCFGLRQAWEHGS 201
            LNVDG  + NPR A +GGL R  DG    GFYG +G +  +KAEL  +C GL  AW+ G 
Sbjct: 1368 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFGY 1427

Query: 202  RHLVCYSD 225
            R+++  +D
Sbjct: 1428 RNILVETD 1435


>gb|ABD28496.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 126

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = +1

Query: 13  SMVLNVDGNSIGNPRLARFGGLLRTHDGE*NFGFYGLIGHSDNLKAELAVVCFGLRQAWE 192
           +++LN DG+++ N   A +GGL+R HDG    G +G +G S+ L AE+  +  G++  WE
Sbjct: 11  TLILNDDGSALNNSGKANYGGLIRKHDGSFLRGLFGSVGISNILHAEIQTL-IGIKLCWE 69

Query: 193 HGSRHLVCYSD 225
            G R L+C+ D
Sbjct: 70  TGYRKLMCFFD 80


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 40/71 (56%)
 Frame = +1

Query: 13  SMVLNVDGNSIGNPRLARFGGLLRTHDGE*NFGFYGLIGHSDNLKAELAVVCFGLRQAWE 192
           S+ LNVDGN   +  L  FGGL+R H      GF+G       L  E++ +  GL+  W+
Sbjct: 77  SVALNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPCILHVEISGLYHGLKLCWD 136

Query: 193 HGSRHLVCYSD 225
            G +H+VC+SD
Sbjct: 137 IGIKHVVCHSD 147


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
 Frame = +1

Query: 19   VLNVDGNSIGNPRLARFGGLLRTHDGE*NFGFYGLIGHS-DNLKAELAVVCFGLRQAWEH 195
            +LNVDG+ +G P  A FGG+ R + G    G+ G I  S D L AEL  +  GL  A E 
Sbjct: 1140 ILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLIMAAEM 1199

Query: 196  GSRHLVCYSDXXXXXXXXXXXXXXXXXXXPLISVIKDML 312
            G   L CYSD                    LI  IKD+L
Sbjct: 1200 GIEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLL 1238