BLASTX nr result

ID: Glycyrrhiza24_contig00024790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024790
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...   172   3e-41
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   170   1e-40
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CBI28246.3| unnamed protein product [Vitis vinifera]              111   7e-23
emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]   111   7e-23

>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/107 (78%), Positives = 97/107 (90%)
 Frame = +3

Query: 3    LLTLHEPLFEKTLDHPYPSISEPTINFWNSTFGRQIILDFPPHLLHVLDKLSRHGKLKLQ 182
            LL LHEPLFEKTLDHPYPSISEPTINFWNSTFG+QIILDFP  LL VLDKLSR+G+LKLQ
Sbjct: 953  LLKLHEPLFEKTLDHPYPSISEPTINFWNSTFGQQIILDFPSSLLCVLDKLSRNGRLKLQ 1012

Query: 183  KRSLPSLKKCHTHEEVDDDAMQGYRVTAKHNRASKRVELVLHTQTEA 323
            KRSLP L+KC++H+E  +DA++GYRV+AKHNR+SKRVELVL T  E+
Sbjct: 1013 KRSLPCLQKCYSHDEA-NDALEGYRVSAKHNRSSKRVELVLDTLKES 1058


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
            gi|355510459|gb|AES91601.1| Telomere-associated protein
            RIF1 [Medicago truncatula]
          Length = 1121

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/107 (79%), Positives = 90/107 (84%)
 Frame = +3

Query: 3    LLTLHEPLFEKTLDHPYPSISEPTINFWNSTFGRQIILDFPPHLLHVLDKLSRHGKLKLQ 182
            LL LHEPLFEKTLDHPYPSISE TI FWNSTF +QII DFPP LLHVLDKLSR GKLKLQ
Sbjct: 942  LLELHEPLFEKTLDHPYPSISEATIEFWNSTFAQQIIFDFPPRLLHVLDKLSRQGKLKLQ 1001

Query: 183  KRSLPSLKKCHTHEEVDDDAMQGYRVTAKHNRASKRVELVLHTQTEA 323
             RS+ S KKC+T EEV  DA+QGYRV AKHNR SKRVELVL TQ +A
Sbjct: 1002 SRSISSFKKCNTREEV-GDALQGYRVAAKHNRTSKRVELVLDTQKDA 1047


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/106 (56%), Positives = 74/106 (69%)
 Frame = +3

Query: 3    LLTLHEPLFEKTLDHPYPSISEPTINFWNSTFGRQIILDFPPHLLHVLDKLSRHGKLKLQ 182
            LL L  PL EKTLDHP  +ISE T+ FWNST+G+QI LD+P  LL +LDKLSR+ ++ LQ
Sbjct: 936  LLKLQAPLLEKTLDHPKSTISELTVTFWNSTYGKQIKLDYPESLLDILDKLSRNKRINLQ 995

Query: 183  KRSLPSLKKCHTHEEVDDDAMQGYRVTAKHNRASKRVELVLHTQTE 320
             +SLP L KCH+  EV     Q  RVTA ++R SKRVELV  T  +
Sbjct: 996  TKSLPFLVKCHSISEV---TAQRSRVTATNSRNSKRVELVEDTANQ 1038


>emb|CBI28246.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/106 (56%), Positives = 73/106 (68%)
 Frame = +3

Query: 6   LTLHEPLFEKTLDHPYPSISEPTINFWNSTFGRQIILDFPPHLLHVLDKLSRHGKLKLQK 185
           L L  PL EKTLDHP PSIS+ TI FWNST+  QI LD+P  L HVLDKLSR G++ L K
Sbjct: 102 LELQAPLLEKTLDHPNPSISDSTIAFWNSTYSEQIQLDYPQSLCHVLDKLSRSGRINLCK 161

Query: 186 RSLPSLKKCHTHEEVDDDAMQGYRVTAKHNRASKRVELVLHTQTEA 323
           R+   L+KC++  EV     Q Y+VTA  NR+SKRVELV  T  ++
Sbjct: 162 RTPSFLQKCNSRVEV--ATPQRYKVTATKNRSSKRVELVEATVNDS 205


>emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]
          Length = 1138

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/106 (56%), Positives = 73/106 (68%)
 Frame = +3

Query: 6    LTLHEPLFEKTLDHPYPSISEPTINFWNSTFGRQIILDFPPHLLHVLDKLSRHGKLKLQK 185
            L L  PL EKTLDHP PSIS+ TI FWNST+  QI LD+P  L HVLDKLSR G++ L K
Sbjct: 981  LXLQAPLLEKTLDHPNPSISDSTIAFWNSTYSEQIQLDYPQSLCHVLDKLSRSGRINLCK 1040

Query: 186  RSLPSLKKCHTHEEVDDDAMQGYRVTAKHNRASKRVELVLHTQTEA 323
            R+   L+KC++  EV     Q Y+VTA  NR+SKRVELV  T  ++
Sbjct: 1041 RTPSFLQKCNSRVEVAXP--QRYKVTATKNRSSKRVELVEATVNDS 1084


Top