BLASTX nr result

ID: Glycyrrhiza24_contig00024772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024772
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                   219   2e-55
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...   219   2e-55
ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Gl...    68   7e-10

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/135 (76%), Positives = 113/135 (83%)
 Frame = -2

Query: 406  VTLDMSGNNFVHLRAGCISXXXXXXXXXXRCCPSLQSLPKLPPNVHYVNASDCASMKPLS 227
            VTLD+SGNNFV+LR GCIS            C +LQSLP LPPNVH+VN SDC+S+KPLS
Sbjct: 751  VTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDCSSLKPLS 810

Query: 226  DPQRIWGHLGSFAFDKLQDENQLKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADS 47
            DPQ IWGHL SFAFDKLQD NQ+KTLLV PGNEIPSTFFYQNYFDRDIQYLKDNYIWADS
Sbjct: 811  DPQEIWGHLASFAFDKLQDANQIKTLLVGPGNEIPSTFFYQNYFDRDIQYLKDNYIWADS 870

Query: 46   TVSISMDLAQLHHRY 2
            TVSIS+++AQL  RY
Sbjct: 871  TVSISINMAQLRQRY 885


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/135 (76%), Positives = 113/135 (83%)
 Frame = -2

Query: 406  VTLDMSGNNFVHLRAGCISXXXXXXXXXXRCCPSLQSLPKLPPNVHYVNASDCASMKPLS 227
            VTLD+SGNNFV+LR GCIS            C +LQSLP LPPNVH+VN SDC+S+KPLS
Sbjct: 934  VTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDCSSLKPLS 993

Query: 226  DPQRIWGHLGSFAFDKLQDENQLKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADS 47
            DPQ IWGHL SFAFDKLQD NQ+KTLLV PGNEIPSTFFYQNYFDRDIQYLKDNYIWADS
Sbjct: 994  DPQEIWGHLASFAFDKLQDANQIKTLLVGPGNEIPSTFFYQNYFDRDIQYLKDNYIWADS 1053

Query: 46   TVSISMDLAQLHHRY 2
            TVSIS+++AQL  RY
Sbjct: 1054 TVSISINMAQLRQRY 1068


>ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = -2

Query: 400  LDMSGNNFVHLRAGCISXXXXXXXXXXRCCPSLQSLPKLPPNVHYVNASDCASMKPLS-D 224
            LD+SGNNFV+  A CI             CP L+SLP LPPN+  + A++C  +KP + D
Sbjct: 865  LDLSGNNFVNPPAQCIINLSMLQNLSFNDCPRLESLPVLPPNLQGLYANNCPKLKPFNLD 924

Query: 223  PQRIWGHLGSFAFDKLQDENQLKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADST 44
             + +W    + +  ++      +   + PGNEIP  F  QN    D  +   + +  DS 
Sbjct: 925  EEMLWKIYETQS--RMDPIEGPEVWFIIPGNEIPCWFDNQNCLAIDSSHHPYDKLGCDSV 982

Query: 43   VSISMDL 23
             SI++D+
Sbjct: 983  TSITVDV 989


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