BLASTX nr result

ID: Glycyrrhiza24_contig00024732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024732
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531092.1| PREDICTED: uncharacterized protein LOC100527...    70   2e-10
ref|XP_002316734.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003633026.1| PREDICTED: uncharacterized protein LOC100854...    59   5e-07
ref|XP_003524797.1| PREDICTED: uncharacterized protein LOC100791...    58   7e-07
ref|XP_003589087.1| hypothetical protein MTR_1g018340 [Medicago ...    55   6e-06

>ref|XP_003531092.1| PREDICTED: uncharacterized protein LOC100527154 [Glycine max]
           gi|255631674|gb|ACU16204.1| unknown [Glycine max]
          Length = 71

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +2

Query: 65  MVGGKKRWFFKRLRKESLRWKFLWPAFKLKRL-TLPXXXXXXXXXXXXXAFEAIVLVLTV 241
           MV  K+ W  KRL++ESLRWK+L  AFK KRL +LP              FEAI LVLT 
Sbjct: 1   MVEKKRSWLSKRLKRESLRWKYLGAAFKWKRLSSLPVSFFNNVAFKILSLFEAIFLVLTA 60

Query: 242 CFFYLCCG 265
           CFFYL CG
Sbjct: 61  CFFYLMCG 68


>ref|XP_002316734.1| predicted protein [Populus trichocarpa] gi|222859799|gb|EEE97346.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
 Frame = +2

Query: 50  EGGVGMVGGKKR----------WFFKRLR-KESLRW--KFLWPAFKLKRLTLPXXXXXXX 190
           EG +G  G   R          W F+RL+ KES  W  KF+  AFK KRL +        
Sbjct: 2   EGDIGRSGNSSRGSKSSKKWKIWLFRRLKLKESWGWRLKFIGSAFKWKRLNIQLSFFDDL 61

Query: 191 XXXXXXAFEAIVLVLTVCFFYLCCG 265
                   EAIVLV+T+CFFYLCCG
Sbjct: 62  IFKLVSVLEAIVLVITLCFFYLCCG 86


>ref|XP_003633026.1| PREDICTED: uncharacterized protein LOC100854721 isoform 1 [Vitis
           vinifera]
          Length = 69

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +2

Query: 74  GKKRWFFKRLRKE-SLRWKFLWPAFKLKRLTLPXXXXXXXXXXXXXAFEAIVLVLTVCFF 250
           GKKR FF+R+ ++   RWKF+  AF+ +RL                 FEAIVLV T+CFF
Sbjct: 2   GKKRGFFRRISEDYKWRWKFMSSAFRWRRLRFQLSFIDDVVFRIMYVFEAIVLVATLCFF 61

Query: 251 YLCCG 265
           YL CG
Sbjct: 62  YLFCG 66


>ref|XP_003524797.1| PREDICTED: uncharacterized protein LOC100791471 [Glycine max]
          Length = 74

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/71 (50%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
 Frame = +2

Query: 65  MVGGKKR--WFFKRLRKESLRWKFLWPA-FKLKRLT-LPXXXXXXXXXXXXXAFEAIVLV 232
           MV   KR  WF KRL++ES RWK+L  A FK K L+  P              FEAI LV
Sbjct: 1   MVEKNKRSSWFSKRLKRESQRWKYLGAAIFKWKSLSSFPVSFFNHVAFKILSLFEAIFLV 60

Query: 233 LTVCFFYLCCG 265
           LT CFFYL CG
Sbjct: 61  LTACFFYLMCG 71


>ref|XP_003589087.1| hypothetical protein MTR_1g018340 [Medicago truncatula]
           gi|355478135|gb|AES59338.1| hypothetical protein
           MTR_1g018340 [Medicago truncatula]
          Length = 221

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/62 (46%), Positives = 32/62 (51%)
 Frame = +2

Query: 80  KRWFFKRLRKESLRWKFLWPAFKLKRLTLPXXXXXXXXXXXXXAFEAIVLVLTVCFFYLC 259
           KRWFFKRL KES R K    A K KR   P              FE +VL + + FFYLC
Sbjct: 157 KRWFFKRLSKESWRLKNFLSALKWKRNYWPFSFINYVNFKIKLVFETMVLFIMLSFFYLC 216

Query: 260 CG 265
           CG
Sbjct: 217 CG 218


Top