BLASTX nr result

ID: Glycyrrhiza24_contig00024721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024721
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42760.1| unknown [Medicago truncatula]                           98   8e-19
ref|XP_003601871.1| Pectate lyase [Medicago truncatula] gi|35549...    98   8e-19
gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis tha...    88   6e-16
gb|AAM65103.1| putative pectate lyase [Arabidopsis thaliana]           88   6e-16
ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana...    88   6e-16

>gb|AFK42760.1| unknown [Medicago truncatula]
          Length = 274

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/69 (68%), Positives = 50/69 (72%)
 Frame = -2

Query: 485 ENAAQSQWKKWNWRSSGDLLLNGAFFRPXXXXXXXXXXXXXXXXAKPSTLVGSITASAGS 306
           ENA QSQWK WNWRSSGDL+LNGAFFRP                AKPS+LV S+TASAGS
Sbjct: 206 ENAGQSQWKNWNWRSSGDLMLNGAFFRPSGAGSSSSYARASSLAAKPSSLVASLTASAGS 265

Query: 305 LNCRKGSRC 279
           LNCRKGSRC
Sbjct: 266 LNCRKGSRC 274


>ref|XP_003601871.1| Pectate lyase [Medicago truncatula] gi|355490919|gb|AES72122.1|
           Pectate lyase [Medicago truncatula]
          Length = 403

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/69 (68%), Positives = 50/69 (72%)
 Frame = -2

Query: 485 ENAAQSQWKKWNWRSSGDLLLNGAFFRPXXXXXXXXXXXXXXXXAKPSTLVGSITASAGS 306
           ENA QSQWK WNWRSSGDL+LNGAFFRP                AKPS+LV S+TASAGS
Sbjct: 335 ENAGQSQWKNWNWRSSGDLMLNGAFFRPSGAGSSSSYARASSLAAKPSSLVASLTASAGS 394

Query: 305 LNCRKGSRC 279
           LNCRKGSRC
Sbjct: 395 LNCRKGSRC 403


>gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis thaliana]
          Length = 408

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/69 (57%), Positives = 50/69 (72%)
 Frame = -2

Query: 485 ENAAQSQWKKWNWRSSGDLLLNGAFFRPXXXXXXXXXXXXXXXXAKPSTLVGSITASAGS 306
           E+A +S+WK+WNWRSSGDLLLNGAFF P                AKPS+LVG +T+++G+
Sbjct: 340 EDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGA 399

Query: 305 LNCRKGSRC 279
           LNCRKGSRC
Sbjct: 400 LNCRKGSRC 408


>gb|AAM65103.1| putative pectate lyase [Arabidopsis thaliana]
          Length = 406

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/69 (57%), Positives = 50/69 (72%)
 Frame = -2

Query: 485 ENAAQSQWKKWNWRSSGDLLLNGAFFRPXXXXXXXXXXXXXXXXAKPSTLVGSITASAGS 306
           E+A +S+WK+WNWRSSGDLLLNGAFF P                AKPS+LVG +T+++G+
Sbjct: 338 EDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGA 397

Query: 305 LNCRKGSRC 279
           LNCRKGSRC
Sbjct: 398 LNCRKGSRC 406


>ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana]
           gi|334186896|ref|NP_001190827.1| putative pectate lyase
           18 [Arabidopsis thaliana]
           gi|32129908|sp|Q9C5M8.2|PEL18_ARATH RecName:
           Full=Probable pectate lyase 18; AltName: Full=Pectate
           lyase A10; Flags: Precursor gi|57222166|gb|AAW38990.1|
           At4g24780 [Arabidopsis thaliana]
           gi|332659555|gb|AEE84955.1| putative pectate lyase 18
           [Arabidopsis thaliana] gi|332659556|gb|AEE84956.1|
           putative pectate lyase 18 [Arabidopsis thaliana]
          Length = 408

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/69 (57%), Positives = 50/69 (72%)
 Frame = -2

Query: 485 ENAAQSQWKKWNWRSSGDLLLNGAFFRPXXXXXXXXXXXXXXXXAKPSTLVGSITASAGS 306
           E+A +S+WK+WNWRSSGDLLLNGAFF P                AKPS+LVG +T+++G+
Sbjct: 340 EDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGA 399

Query: 305 LNCRKGSRC 279
           LNCRKGSRC
Sbjct: 400 LNCRKGSRC 408


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