BLASTX nr result

ID: Glycyrrhiza24_contig00024717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024717
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554780.1| PREDICTED: rho GTPase-activating protein 32-...   223   2e-56
ref|XP_003521820.1| PREDICTED: rho GTPase-activating protein 25-...   211   4e-53
gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus]      196   2e-48
ref|XP_003627492.1| Rac GTPase activating protein, partial [Medi...   149   3e-34
ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-l...   129   2e-28

>ref|XP_003554780.1| PREDICTED: rho GTPase-activating protein 32-like [Glycine max]
          Length = 497

 Score =  223 bits (567), Expect = 2e-56
 Identities = 115/159 (72%), Positives = 125/159 (78%), Gaps = 4/159 (2%)
 Frame = -1

Query: 466 DPLTALIHAVQVMNFLKTLILKTLRERDESVAKARQLSSLSDSPSCKGDSHPLKFDTEES 287
           DPLTALIHAVQVMNFLKTLILKTLRERDES+AKARQLSSL DSPSCKGDSHPL+ + +E 
Sbjct: 316 DPLTALIHAVQVMNFLKTLILKTLRERDESIAKARQLSSLLDSPSCKGDSHPLEVNNKEE 375

Query: 286 SEQTEDQDTCATKTPVKSKFSRASTLGRIEWCIEEKLWSSEEKGNGGGRXXXXXXXXXXX 107
           S + E ++TC+TK PVKSKFSR STLGRIEWCIEEKLW SEEKGNG G            
Sbjct: 376 SCEEETEETCSTKPPVKSKFSRTSTLGRIEWCIEEKLWRSEEKGNGVGE-LESVSDSSSP 434

Query: 106 XXXXXGPLENR----YDGEHWLRLRKGVRRLCRHPVFQL 2
                GPLENR    YD EHW++LR GVRRLCRHPVFQL
Sbjct: 435 SRYENGPLENRYRGIYDSEHWVKLRNGVRRLCRHPVFQL 473


>ref|XP_003521820.1| PREDICTED: rho GTPase-activating protein 25-like [Glycine max]
          Length = 422

 Score =  211 bits (538), Expect = 4e-53
 Identities = 110/159 (69%), Positives = 121/159 (76%), Gaps = 4/159 (2%)
 Frame = -1

Query: 466 DPLTALIHAVQVMNFLKTLILKTLRERDESVAKARQLSSLSDSPSCKGDSHPLKFDTEES 287
           DPLTALIHAVQVMNFLKTLILKTLRERD+S+AKARQLSSL DSPSCKGDSHP++ + +E 
Sbjct: 243 DPLTALIHAVQVMNFLKTLILKTLRERDKSIAKARQLSSLLDSPSCKGDSHPMEVNNKEE 302

Query: 286 SEQTEDQDTCATKTPVKSKFSRASTLGRIEWCIEEKLWSSEEKGNGGGRXXXXXXXXXXX 107
           S    D++TC  K P+KSKFSR STLGRIEWCIEEKLW SEEKGNG              
Sbjct: 303 S---CDEETCTPKPPMKSKFSRTSTLGRIEWCIEEKLWRSEEKGNGVVGEFESVLGSSSP 359

Query: 106 XXXXXGPLENR----YDGEHWLRLRKGVRRLCRHPVFQL 2
                GPLENR    YD EHW++LR GVRRLCRHPVFQL
Sbjct: 360 SRYENGPLENRYRGIYDSEHWVKLRNGVRRLCRHPVFQL 398


>gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus]
          Length = 424

 Score =  196 bits (498), Expect = 2e-48
 Identities = 108/159 (67%), Positives = 118/159 (74%), Gaps = 4/159 (2%)
 Frame = -1

Query: 466 DPLTALIHAVQVMNFLKTLILKTLRERDESVAKARQLSSLSDSPSCKGDSHPLKFDTEES 287
           DPLTALIHAVQVMNFLKTLILKTLRERDES+AKARQLSSL +SPSCKGDSHP K + EES
Sbjct: 251 DPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCKGDSHPFKDNREES 310

Query: 286 SEQTEDQDTCATKTPVKSKFSRASTLGRIEWCIEEKLWSSEEKGNGGGRXXXXXXXXXXX 107
           S Q    DTCAT  P KS+FS      R+EWC++EK+WSSEEKG GGG            
Sbjct: 311 SAQ--PVDTCATMPPDKSEFS------RMEWCVDEKVWSSEEKGTGGG-ALESVSGGSSP 361

Query: 106 XXXXXGPLENR----YDGEHWLRLRKGVRRLCRHPVFQL 2
                GPLE+R    YD EHWLRLRKGVRRLC+HPVFQL
Sbjct: 362 SRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQL 400


>ref|XP_003627492.1| Rac GTPase activating protein, partial [Medicago truncatula]
           gi|355521514|gb|AET01968.1| Rac GTPase activating
           protein, partial [Medicago truncatula]
          Length = 488

 Score =  149 bits (375), Expect = 3e-34
 Identities = 94/162 (58%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
 Frame = -1

Query: 466 DPLTALIHAVQVMNFLKTLILKTLRERDESVAKARQLSSLSDSPSCKGDSHPLKFDTEES 287
           DPLTALIHAVQVMNFLKTLILK LRER+ES+  AR LS   D  SC  +  P  F+ EES
Sbjct: 310 DPLTALIHAVQVMNFLKTLILKMLREREESIDNARLLSHSMDFASCNDEFPPFSFNKEES 369

Query: 286 S-EQTEDQDTCATKTPVKSKFSRASTLGRIEWCIEEKLWSSEEKGNGGGRXXXXXXXXXX 110
           S EQ ED     + T  K KFSR STLGRIEW + EKL SSEEK N              
Sbjct: 370 SCEQIEDACDKNSST-TKRKFSRTSTLGRIEWSV-EKLRSSEEKRN-REEVFRSFSSDSV 426

Query: 109 XXXXXXGPLEN------RYDGEHWLRLRKGVRRLCRHPVFQL 2
                 GPLEN      RYD EHW RLR GVR+LCRHPVFQL
Sbjct: 427 TPRYESGPLENSYSYRRRYDSEHWSRLRNGVRKLCRHPVFQL 468


>ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-like [Vitis vinifera]
          Length = 474

 Score =  129 bits (325), Expect = 2e-28
 Identities = 81/165 (49%), Positives = 96/165 (58%), Gaps = 10/165 (6%)
 Frame = -1

Query: 466 DPLTALIHAVQVMNFLKTLILKTLRERDESVAKARQLSSLSDSPSCKGDSHPLKFDTEES 287
           DPLTALIHAVQVMNFLKTLI+KTL+ER+ES AK+R LSS +DSPS K D H    +   S
Sbjct: 300 DPLTALIHAVQVMNFLKTLIMKTLQEREESAAKSRLLSSCTDSPSSKDDPHSSNSNRNIS 359

Query: 286 SEQTEDQDTCATKTPVKSKFSRASTLGRIEWCIEEKLWSSEEKGNGGGRXXXXXXXXXXX 107
            EQT  QD CA +    S F +   L R+E  IEEK WSS++K                 
Sbjct: 360 CEQT--QDGCAPEEHTISDFLKPDALDRLESDIEEKFWSSQQKSE-AEEEYQSISGSSSP 416

Query: 106 XXXXXGPLENRYDGEH----------WLRLRKGVRRLCRHPVFQL 2
                G L+NR  GE+           L LRKGVR+LCRHP+F L
Sbjct: 417 VVGEAGTLKNRCTGEYENGEVEGILDRLSLRKGVRKLCRHPIFHL 461


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