BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024674
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603234.1| Pentatricopeptide repeat-containing protein ...   220   8e-56
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26

>ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492282|gb|AES73485.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/137 (77%), Positives = 122/137 (89%)
 Frame = +1

Query: 1   LMIKAYVEMGLGEEALLLFSAFHRSGLRPDCITVRTLLMGFGKRTVFERELKQVRAYATK 180
           +M+KAYVEMG G+E L LFSAFHRSGLRPDC++VRT+LMG GK+TVFEREL+QVRAYATK
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252

Query: 181 LFLCDNDDLDVIVWNKTLSQCLQAGEAWKAIGCFRDMIRSRVTCDSLTFVVILSVVASVN 360
           LF+CD DD DV VWNKTLS  LQAGE W+A+ CFRDMI+SRV CDSLT++VILSVVAS+N
Sbjct: 253 LFVCD-DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311

Query: 361 RIEFGKQIHGAVVRSGW 411
            +E GKQIHGAVVR GW
Sbjct: 312 HLELGKQIHGAVVRFGW 328


>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  163 bits (413), Expect = 1e-38
 Identities = 87/139 (62%), Positives = 105/139 (75%), Gaps = 3/139 (2%)
 Frame = +1

Query: 1    LMIKAYVEMGLGEEALLLFSAFHRSGLRPDCITVRTLLMGF-GKRTVFERELKQVRAYAT 177
            +M+KAYV+ GL  EALLLFS F+R+GLRPD +T+ TL      K+ V E +LKQ++AY T
Sbjct: 798  VMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGT 857

Query: 178  KLFLCDNDD--LDVIVWNKTLSQCLQAGEAWKAIGCFRDMIRSRVTCDSLTFVVILSVVA 351
            KLF+ D+DD   DVI WNKTLS  LQ GE W+A+ CF DMI SRV CD LTFVV+LSVVA
Sbjct: 858  KLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVA 917

Query: 352  SVNRIEFGKQIHGAVVRSG 408
             +N +E GKQIHG VVRSG
Sbjct: 918  GLNCLELGKQIHGIVVRSG 936


>ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/137 (61%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1    LMIKAYVEMGLGEEALLLFSAFHRSGLRPDCITVRTLLMGFG-KRTVFERELKQVRAYAT 177
            +M+KAYV+  L  EA+LLFS FHR+G RPD +T+RTL      K+ + E  LKQ +AYAT
Sbjct: 831  VMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILE--LKQFKAYAT 888

Query: 178  KLFLCDNDDLDVIVWNKTLSQCLQAGEAWKAIGCFRDMIRSRVTCDSLTFVVILSVVASV 357
            KLF+ D+D  DVIVWNK LS+ LQ GEAW+A+ CF DMI SRV CD LTFVV+L+VVA +
Sbjct: 889  KLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGL 948

Query: 358  NRIEFGKQIHGAVVRSG 408
            N +E GKQIHG V+RSG
Sbjct: 949  NCLELGKQIHGIVMRSG 965


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/140 (47%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
 Frame = +1

Query: 1    LMIKAYVEMGLGEEALLLFSAFHRSGLRPDCITVRTLLMGFGK--RTVFERELKQVRAYA 174
            +M+KAYVEMGL +EAL  FS FH+SGLRPD  ++R ++ G  +       R ++Q++AYA
Sbjct: 881  VMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEVGYDTGRRYIEQIQAYA 940

Query: 175  TKLFLCDNDDLDVIVWNKTLSQCLQAGEAWKAIGCFRDMI-RSRVTCDSLTFVVILSVVA 351
            TKLF CD D+ DV++WNK LS+ LQAG  W A+ CF +M+  S V  D++T VV+L+   
Sbjct: 941  TKLFFCD-DNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAAT 999

Query: 352  SVNRIEFGKQIHGAVVRSGW 411
                +  GK IHG  ++SG+
Sbjct: 1000 GTGDLMLGKLIHGMTLKSGF 1019


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
 Frame = +1

Query: 1    LMIKAYVEMGLGEEALLLFSAFHRSGLRPDCITVRTLLMGFGKRTVFERE--LKQVRAYA 174
            +M+K YV++GL +EA  LFS FHRSGLRPD  +V+ +L G  +    E +    QV+AYA
Sbjct: 798  MMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYA 857

Query: 175  TKLFLCDNDDLDVIVWNKTLSQCLQAGEAWKAIGCFRDMIRSRVTCDSLTFVVILSVVAS 354
             KL L D D+ DV  WNK LS+CL AG+ W AI CF +M    +  D++T +V+L+ VA 
Sbjct: 858  AKLSLSD-DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAG 916

Query: 355  VNRIEFGKQIHGAVVRSG 408
             + +E GKQ+HG  V+SG
Sbjct: 917  TDDLELGKQVHGIAVKSG 934