BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024656
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   211   6e-53
ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containi...   177   6e-43
emb|CBI30094.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   148   5e-34

>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  211 bits (536), Expect = 6e-53
 Identities = 103/142 (72%), Positives = 119/142 (83%)
 Frame = -2

Query: 426 HVPKLNTHQNYIIFGYYPLLSNLRIRLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLF 247
           ++PKL      I   YYP  +NLRIR  ST+T   EMKRCN+ +S LC+EGK++EARK+F
Sbjct: 14  NLPKLK-----ITHCYYPFQNNLRIRSSSTATLTSEMKRCNYFISKLCREGKVNEARKVF 68

Query: 246 DEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAE 67
           DEMS+RD+CLWTTMISGYIKCG+I EARKLFDR DA KSV+VWTAMVSGYIK N+IEEAE
Sbjct: 69  DEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAE 128

Query: 66  RLFYEMPLRNVVSWNTMIDGYA 1
           RLF EMP+RNVVSWNTMIDGYA
Sbjct: 129 RLFNEMPVRNVVSWNTMIDGYA 150



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/109 (43%), Positives = 73/109 (66%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  M+ L   G+ID+A +LF+EM ERD   WTTM++G  K G +  AR++FD
Sbjct: 166 PERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFD 225

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGY 4
           +   +++VV W AM++GY ++ + +EA +LF  MP R++ SWNTM+ G+
Sbjct: 226 KM-PIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGF 273



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/131 (34%), Positives = 69/131 (52%)
 Frame = -2

Query: 393 IIFGYYPLLSNLRIRLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLW 214
           ++ GY  +        +    P R +   N  +    + G+  EA  LF  M ER+   W
Sbjct: 114 MVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSW 173

Query: 213 TTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNV 34
            T+++    CG I +A +LF+     + VV WT MV+G  K+ +++ A  +F +MP+RNV
Sbjct: 174 NTVMTALAHCGRIDDAERLFNEMRE-RDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNV 232

Query: 33  VSWNTMIDGYA 1
           VSWN MI GYA
Sbjct: 233 VSWNAMIAGYA 243



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/95 (41%), Positives = 61/95 (64%)
 Frame = -2

Query: 288 LCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAM 109
           L K G++D AR++FD+M  R+   W  MI+GY + G   EA KLF+R    + +  W  M
Sbjct: 211 LSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPE-RDMPSWNTM 269

Query: 108 VSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGY 4
           V+G+I++  +  AE+LF+ MP +NV++W  M+ GY
Sbjct: 270 VTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGY 304



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = -2

Query: 351 RLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIK 172
           R +    P R +   N  ++   + G+ DEA KLF+ M ERD   W TM++G+I+ G + 
Sbjct: 221 REVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLN 280

Query: 171 EARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEM 49
            A +LF  +   K+V+ WTAM++GY++    EEA +LF +M
Sbjct: 281 RAEQLF-HAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKM 320


>ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/106 (77%), Positives = 95/106 (89%)
 Frame = -2

Query: 318 MKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDA 139
           MKRCN  +S LC+EG+ID ARK+F+EM ERD  LWTTMI+GY+KCGMI+EARKLFDR DA
Sbjct: 1   MKRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDA 60

Query: 138 MKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGYA 1
            K+VV WTAMV+GYIK NQ++EAERLFYEMPLRNVVSWNTM+DGYA
Sbjct: 61  KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYA 106



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/109 (42%), Positives = 77/109 (70%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  ++ L + G+I++A++LFD+M +RD   WTTM++G  K G +++AR LFD
Sbjct: 122 PERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFD 181

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGY 4
           +   +++VV W AM++GY ++ +++EA +LF  MP R++ SWNTMI G+
Sbjct: 182 QMP-VRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGF 229



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/110 (41%), Positives = 68/110 (61%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  +    + G   +A  LF  M ER+   W T+I+  ++CG I++A++LFD
Sbjct: 91  PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFD 150

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGYA 1
           +    + VV WT MV+G  K+ ++E+A  LF +MP+RNVVSWN MI GYA
Sbjct: 151 QMKD-RDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYA 199



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 351 RLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIK 172
           R +    P R +   N  ++   +  ++DEA +LF  M ERD   W TMI+G+I+ G + 
Sbjct: 177 RALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELN 236

Query: 171 EARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNT 19
            A KLF      K+V+ WTAM++GY++    EEA R+F +M   N +  NT
Sbjct: 237 RAEKLFGEMQE-KNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNT 286


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/147 (55%), Positives = 103/147 (70%), Gaps = 6/147 (4%)
 Frame = -2

Query: 423 VPKLNTHQNYIIFGYYPLLSNLRIRLISTSTPCRE------MKRCNFSMSMLCKEGKIDE 262
           +P L   +   I G+Y   S    R    S P ++      + RCN+ ++ L K+G+I E
Sbjct: 26  IPALINLKLLRIPGFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIME 85

Query: 261 ARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVSGYIKSNQ 82
           AR+LFDEM E D   WTT+ISGYIKCGMI+EAR+LFDR DA K+VV WTAMV GYI+SN+
Sbjct: 86  ARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNK 145

Query: 81  IEEAERLFYEMPLRNVVSWNTMIDGYA 1
           I +AE+LF EMP +NVVSWNTMIDGYA
Sbjct: 146 ISDAEKLFNEMPNKNVVSWNTMIDGYA 172



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/108 (43%), Positives = 66/108 (61%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  MSML + G+I+EAR+LFD M ERD   WT MI+G     ++ EA  LF+
Sbjct: 188 PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAG-----LLDEALDLFE 242

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDG 7
           R    + +  W  M++G I++  +  A +LF EMP +NV+SW TMI G
Sbjct: 243 RMPE-RDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITG 289



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 44/108 (40%), Positives = 65/108 (60%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P + +   N  +    + G+ID A  LF++M ER+   W T++S   +CG I+EAR+LFD
Sbjct: 157 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 216

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDG 7
           R    + V+ WTAM++G      ++EA  LF  MP R++ SWNTMI G
Sbjct: 217 RMPE-RDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITG 258



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -2

Query: 282 KEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVS 103
           +  KI +A KLF+EM  ++   W TMI GY + G I  A  LF++    ++VV W  ++S
Sbjct: 142 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE-RNVVSWNTVMS 200

Query: 102 GYIKSNQIEEAERLFYEMPLRNVVSWNTMIDG 7
              +  +IEEA RLF  MP R+V+SW  MI G
Sbjct: 201 MLAQCGRIEEARRLFDRMPERDVISWTAMIAG 232


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/147 (55%), Positives = 103/147 (70%), Gaps = 6/147 (4%)
 Frame = -2

Query: 423 VPKLNTHQNYIIFGYYPLLSNLRIRLISTSTPCRE------MKRCNFSMSMLCKEGKIDE 262
           +P L   +   I G+Y   S    R    S P ++      + RCN+ ++ L K+G+I E
Sbjct: 11  IPALINLKLLRIPGFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIME 70

Query: 261 ARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVSGYIKSNQ 82
           AR+LFDEM E D   WTT+ISGYIKCGMI+EAR+LFDR DA K+VV WTAMV GYI+SN+
Sbjct: 71  ARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNK 130

Query: 81  IEEAERLFYEMPLRNVVSWNTMIDGYA 1
           I +AE+LF EMP +NVVSWNTMIDGYA
Sbjct: 131 ISDAEKLFNEMPNKNVVSWNTMIDGYA 157



 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  MSML + G+I+EAR+LFD M ERD   WT MI+G  K G I EAR LFD
Sbjct: 173 PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFD 232

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDG 7
           R    ++VV W AM++GY ++ +++EA  LF  MP R++ SWNTMI G
Sbjct: 233 RMPE-RNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITG 279



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/110 (45%), Positives = 70/110 (63%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P + +   N  +    + G+ID A  LF++M ER+   W T++S   +CG I+EAR+LFD
Sbjct: 142 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 201

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGYA 1
           R    + V+ WTAM++G  K+ +I+EA  LF  MP RNVVSWN MI GYA
Sbjct: 202 RMPE-RDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYA 250



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/101 (36%), Positives = 59/101 (58%)
 Frame = -2

Query: 351 RLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIK 172
           RL+    P R +   N  ++   +  ++DEA  LF+ M ERD   W TMI+G I+ G ++
Sbjct: 228 RLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLR 287

Query: 171 EARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEM 49
            ARKLF+     K+V+ WT M++G ++  + EEA ++F  M
Sbjct: 288 RARKLFNEM-PKKNVISWTTMITGCVQEGESEEALKIFSRM 327


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  148 bits (373), Expect = 5e-34
 Identities = 77/147 (52%), Positives = 104/147 (70%), Gaps = 18/147 (12%)
 Frame = -2

Query: 387 FGYYP-LLSNLRIRLIST-----------STPCREMK------RCNFSMSMLCKEGKIDE 262
           FG Y  LL NL   ++S+           S+P R+        R N+ ++ L KEGKI E
Sbjct: 25  FGRYAFLLCNLHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGE 84

Query: 261 ARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFDRSDAMKSVVVWTAMVSGYIKSNQ 82
           AR++F+EM +RD   WT +I+GYIKCGMI+EA+ LFDR+DA+K+VV WTA+VSGY++ N+
Sbjct: 85  ARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNR 144

Query: 81  IEEAERLFYEMPLRNVVSWNTMIDGYA 1
           IEEA RLF  MP++NV+SWNTMI+GYA
Sbjct: 145 IEEARRLFDAMPVKNVISWNTMIEGYA 171



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/109 (41%), Positives = 71/109 (65%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R +   N  ++   +  ++DEA++LF+ M ERD   WTTM++G  K G I +AR LFD
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFD 246

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGY 4
           +   +++VV W  M+ GY ++ +++EA +LF +MP R + SWNTMI G+
Sbjct: 247 KMP-VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/117 (39%), Positives = 74/117 (63%)
 Frame = -2

Query: 351 RLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIK 172
           R +  + P + +   N  +    ++G ID+A  LF+ M ER+   W T+I+ +++   + 
Sbjct: 149 RRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVD 208

Query: 171 EARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGYA 1
           EA++LF+R    + V+ WT MV+G  K+ +I++A  LF +MP+RNVVSWNTMI GYA
Sbjct: 209 EAQELFNRMPE-RDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYA 264



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/109 (36%), Positives = 66/109 (60%)
 Frame = -2

Query: 330 PCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIKEARKLFD 151
           P R++      ++ L K G+ID+AR LFD+M  R+   W TMI GY +   + EA KLF+
Sbjct: 218 PERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFE 277

Query: 150 RSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWNTMIDGY 4
           +    + +  W  M++G+I++ ++E A   FY+M  +NVV+W  +I G+
Sbjct: 278 QMPE-RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGH 325



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/110 (36%), Positives = 65/110 (59%)
 Frame = -2

Query: 351 RLISTSTPCREMKRCNFSMSMLCKEGKIDEARKLFDEMSERDTCLWTTMISGYIKCGMIK 172
           RL+    P R +   N  +    +  ++DEA KLF++M ER+   W TMI+G+I+ G ++
Sbjct: 242 RLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLE 301

Query: 171 EARKLFDRSDAMKSVVVWTAMVSGYIKSNQIEEAERLFYEMPLRNVVSWN 22
            A   F +  + K+VV WTA++SG+++  + EEA ++F EM   N V  N
Sbjct: 302 RAVDFFYKM-SNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPN 350