BLASTX nr result

ID: Glycyrrhiza24_contig00024644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024644
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   472   e-131
ref|XP_003543849.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   468   e-129
ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   427   e-117
emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]   425   e-116
ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative...   414   e-113

>ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 829

 Score =  472 bits (1215), Expect = e-131
 Identities = 230/293 (78%), Positives = 264/293 (90%), Gaps = 1/293 (0%)
 Frame = +2

Query: 2    NSLSKYNGDKVVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDHV 181
            NSL+KYNGDK+VP+PASQVKQIAGRAGRRGCLYPDGLATT+HLDDLDYLIECLKQPFD V
Sbjct: 537  NSLAKYNGDKMVPIPASQVKQIAGRAGRRGCLYPDGLATTMHLDDLDYLIECLKQPFDDV 596

Query: 182  KRVGLFPFFQQVELFAGQLPNMTFSQLLEKFGESCRLDGSYFLCRHDHIKKIANMLEKIQ 361
            K+VGLFPF++QVELF+GQLP++TF Q+LEKFGE+CRLDGSYFLC+H+HIKKIANML K+Q
Sbjct: 597  KKVGLFPFYEQVELFSGQLPDLTFPQILEKFGENCRLDGSYFLCQHNHIKKIANMLGKVQ 656

Query: 362  GLSLEDRFNFSFAPVNVRDPKAMYHLLRFATSFGQKIPVNIAMGMPKCSARNDSELLDLE 541
            GLSL+D FNF FAPVNVRDPKAMYHLLR+ATSFGQK+PVN+AMGMP+ SARND+ELLDLE
Sbjct: 657  GLSLKDHFNFCFAPVNVRDPKAMYHLLRYATSFGQKLPVNVAMGMPRSSARNDAELLDLE 716

Query: 542  TRHQVLSTYLWLSNHFDGENFPYVKRAEAMASDIAKLLAQSLIKANWKPESRNKGKPKTG 721
            TRHQVLS YLWLSNHFD E FPYVK+ EAMAS IA LL QSL++ANWKPESR KG+PKT 
Sbjct: 717  TRHQVLSMYLWLSNHFDEETFPYVKKVEAMASCIADLLGQSLVRANWKPESRIKGRPKTE 776

Query: 722  QSE-EQTEPSSKVVLKTEKMENGYSRPQSLIKLHDKKRNENSSHLDRSKKVAA 877
            +SE  Q E  S+V L+TEK E GYSR +SL+KL++KKR+E S  L  SK+VAA
Sbjct: 777  KSEGGQLETRSEVELQTEKREMGYSRLRSLLKLYEKKRHEKSLLLGHSKEVAA 829


>ref|XP_003543849.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 805

 Score =  468 bits (1203), Expect = e-129
 Identities = 225/275 (81%), Positives = 253/275 (92%)
 Frame = +2

Query: 2    NSLSKYNGDKVVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDHV 181
            NSL+KYNGDK+VPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFD V
Sbjct: 531  NSLTKYNGDKMVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDDV 590

Query: 182  KRVGLFPFFQQVELFAGQLPNMTFSQLLEKFGESCRLDGSYFLCRHDHIKKIANMLEKIQ 361
            K+VGLFP ++QVELF+GQLP++TF+Q+LEKFGE+CRLDGSYFLC+H+HIKKIANMLEK+Q
Sbjct: 591  KKVGLFPSYEQVELFSGQLPDLTFTQILEKFGENCRLDGSYFLCQHNHIKKIANMLEKVQ 650

Query: 362  GLSLEDRFNFSFAPVNVRDPKAMYHLLRFATSFGQKIPVNIAMGMPKCSARNDSELLDLE 541
            GLSLEDRFNF FAPVNVRDPKAMYHLLR+ATSFGQK+PVN+AMGMP+ SARND+ELLDLE
Sbjct: 651  GLSLEDRFNFCFAPVNVRDPKAMYHLLRYATSFGQKLPVNVAMGMPRSSARNDAELLDLE 710

Query: 542  TRHQVLSTYLWLSNHFDGENFPYVKRAEAMASDIAKLLAQSLIKANWKPESRNKGKPKTG 721
            TRHQVLS YLWLSNHFD E FPYVK+ EAMAS IA LL QSL+KANWKPESR KG+PKT 
Sbjct: 711  TRHQVLSMYLWLSNHFDEETFPYVKKVEAMASCIADLLGQSLVKANWKPESRIKGRPKTE 770

Query: 722  QSEEQTEPSSKVVLKTEKMENGYSRPQSLIKLHDK 826
            +SE Q E  S V L+TEK E GYSR +SL+KL++K
Sbjct: 771  KSEGQLETRSAVELQTEKTEMGYSRTRSLLKLYEK 805


>ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Vitis vinifera]
          Length = 806

 Score =  427 bits (1099), Expect = e-117
 Identities = 213/297 (71%), Positives = 242/297 (81%), Gaps = 6/297 (2%)
 Frame = +2

Query: 5    SLSKYNGDKVVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDHVK 184
            SLSKYNGDK+VPVPA+QVKQIAGRAGRRG  YPDGL TTLHLDDLDYLIECLKQPFD +K
Sbjct: 527  SLSKYNGDKIVPVPATQVKQIAGRAGRRGSRYPDGLTTTLHLDDLDYLIECLKQPFDDIK 586

Query: 185  RVGLFPFFQQVELFAGQLPNMTFSQLLEKFGESCRLDGSYFLCRHDHIKKIANMLEKIQG 364
            +VGLFPFF+QVELFAGQLP++T S LLEKF E+C+LDGSYFLCRHDHIKK+ANML+K+QG
Sbjct: 587  KVGLFPFFEQVELFAGQLPDVTLSHLLEKFSENCQLDGSYFLCRHDHIKKVANMLQKVQG 646

Query: 365  LSLEDRFNFSFAPVNVRDPKAMYHLLRFATSFGQKIPVNIAMGMPKCSARNDSELLDLET 544
            LSLEDRFNF FAPVN+RDPKAMYHLLRFA+S+ Q +PVNIAMGMPK SARNDSELLDLET
Sbjct: 647  LSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSQNLPVNIAMGMPKGSARNDSELLDLET 706

Query: 545  RHQVLSTYLWLSNHFDGENFPYVKRAEAMASDIAKLLAQSLIKANWKPESRNKGKPKTGQ 724
            +HQVLS YLWLS+HF  E FPYVK+AE MA+ IA LL QSL KA WKPESR  GKPK  Q
Sbjct: 707  KHQVLSMYLWLSHHFTEETFPYVKKAETMATGIADLLGQSLSKACWKPESRQAGKPKPQQ 766

Query: 725  SEEQTEPSSKVVLKTEKMENGYSRPQSLIKLHDKKRNENSSHLDR------SKKVAA 877
             E+                 GY RP+SL+KL D++R+E S   ++      S+KVAA
Sbjct: 767  KED-----------------GYERPRSLVKLFDERRHEKSPEHEKFPQHEHSEKVAA 806


>emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]
          Length = 906

 Score =  425 bits (1092), Expect = e-116
 Identities = 208/280 (74%), Positives = 233/280 (83%)
 Frame = +2

Query: 5    SLSKYNGDKVVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDHVK 184
            SLSKYNGDK+VPVPA+QVKQIAGRAGRRG  YPDGL TTLHLDDLDYLIECLKQPFD +K
Sbjct: 574  SLSKYNGDKIVPVPATQVKQIAGRAGRRGSRYPDGLTTTLHLDDLDYLIECLKQPFDDIK 633

Query: 185  RVGLFPFFQQVELFAGQLPNMTFSQLLEKFGESCRLDGSYFLCRHDHIKKIANMLEKIQG 364
            +VGLFPFF+QVELFAGQLP++T S LLEKF E+C LDGSYFLCRHDHIKK+ANML+K+QG
Sbjct: 634  KVGLFPFFEQVELFAGQLPDVTLSHLLEKFSENCXLDGSYFLCRHDHIKKVANMLQKVQG 693

Query: 365  LSLEDRFNFSFAPVNVRDPKAMYHLLRFATSFGQKIPVNIAMGMPKCSARNDSELLDLET 544
            LSLEDRFNF FAPVN+RDPKAMYHLLRFA+S+ Q +PVNIAMGMPK SARNDSELLDLET
Sbjct: 694  LSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSQNLPVNIAMGMPKGSARNDSELLDLET 753

Query: 545  RHQVLSTYLWLSNHFDGENFPYVKRAEAMASDIAKLLAQSLIKANWKPESRNKGKPKTGQ 724
            +HQVLS YLWLS+HF  E FPYVK+AE MA+ IA LL QSL KA WKPESR  GKPK  Q
Sbjct: 754  KHQVLSMYLWLSHHFTEETFPYVKKAETMATGIADLLGQSLSKACWKPESRQAGKPKPQQ 813

Query: 725  SEEQTEPSSKVVLKTEKMENGYSRPQSLIKLHDKKRNENS 844
             E+                 GY RP+SL+KL D++R+E S
Sbjct: 814  KED-----------------GYERPRSLVKLFDERRHEKS 836


>ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
            gi|223536331|gb|EEF37981.1| ATP-dependent RNA and DNA
            helicase, putative [Ricinus communis]
          Length = 820

 Score =  414 bits (1063), Expect = e-113
 Identities = 206/292 (70%), Positives = 235/292 (80%)
 Frame = +2

Query: 2    NSLSKYNGDKVVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLKQPFDHV 181
            NSLSKYNGDK+V VPASQVKQIAGRAGRRG  YPDGL TTLHLDDL+YLIECLKQPF+ V
Sbjct: 546  NSLSKYNGDKIVSVPASQVKQIAGRAGRRGSRYPDGLTTTLHLDDLNYLIECLKQPFEEV 605

Query: 182  KRVGLFPFFQQVELFAGQLPNMTFSQLLEKFGESCRLDGSYFLCRHDHIKKIANMLEKIQ 361
            K+VGLFPFF+QVELFAG++PN+TF Q+LEKFGESCRLDGSYFLCRHDHIKK+ANMLEK+Q
Sbjct: 606  KKVGLFPFFEQVELFAGKIPNITFPQMLEKFGESCRLDGSYFLCRHDHIKKVANMLEKVQ 665

Query: 362  GLSLEDRFNFSFAPVNVRDPKAMYHLLRFATSFGQKIPVNIAMGMPKCSARNDSELLDLE 541
            GLSLEDRFNF FAPVN+RDPKAMYHLLRFA+S+ QK+PV IAMGMPK SARND+ELL+LE
Sbjct: 666  GLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSQKVPVGIAMGMPKGSARNDTELLNLE 725

Query: 542  TRHQVLSTYLWLSNHFDGENFPYVKRAEAMASDIAKLLAQSLIKANWKPESRNKGKPKTG 721
            T+HQVLS YLWLS+ F  E FPY K+AEAMA++IA LL  SL KA WK ESR  GK +  
Sbjct: 726  TKHQVLSMYLWLSHQFKEETFPYKKKAEAMATEIADLLGDSLTKARWKLESRQAGKARAK 785

Query: 722  QSEEQTEPSSKVVLKTEKMENGYSRPQSLIKLHDKKRNENSSHLDRSKKVAA 877
            Q ++                 GY RP SLIK + +   +  S  + SKKVAA
Sbjct: 786  QQKD-----------------GYKRPNSLIKRYKETMEDKHSPEECSKKVAA 820


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