BLASTX nr result

ID: Glycyrrhiza24_contig00024603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024603
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    96   5e-18
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    94   1e-17
ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...    79   4e-13
ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    66   3e-09
ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    66   3e-09

>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 150 MEIDSPPDSQPLKSRDRIVRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE 1
           MEID+P DSQPLK RDR+VRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE
Sbjct: 1   MEIDTPSDSQPLKPRDRVVRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE 50


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/50 (92%), Positives = 47/50 (94%)
 Frame = -1

Query: 150 MEIDSPPDSQPLKSRDRIVRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE 1
           MEID P DSQPLK RDR+VRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE
Sbjct: 1   MEIDIPSDSQPLKPRDRVVRRLAQFGVPEEQLDQPGLVAFVKDKRALIPE 50


>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
           gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
           ubr1 [Medicago truncatula]
          Length = 2105

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = -1

Query: 162 MADNMEIDSPPDSQPLKSRDRIVRRLAQFGVPEEQLDQPGLVAFVKDKRALI 7
           MA+NMEIDSP +SQPL+ RDRI+RRL Q+GVPEEQL   GLVAFVK+K+ +I
Sbjct: 1   MAENMEIDSPSESQPLRPRDRIIRRLVQYGVPEEQLTPSGLVAFVKEKKEVI 52


>ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2089

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = -1

Query: 156 DNMEIDSPPDSQPLKSRDRIVRRLAQFGVPEEQLDQ--PGLVAFVKDKRALIPE 1
           D M+I SP +S PLK RDRI+RRLA  GVP+E LDQ   GLV FVKD + LIPE
Sbjct: 2   DEMDIGSPSESAPLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPE 55


>ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2099

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = -1

Query: 156 DNMEIDSPPDSQPLKSRDRIVRRLAQFGVPEEQLDQ--PGLVAFVKDKRALIPE 1
           D M+I SP +S PLK RDRI+RRLA  GVP+E LDQ   GLV FVKD + LIPE
Sbjct: 2   DEMDIGSPSESAPLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPE 55


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