BLASTX nr result
ID: Glycyrrhiza24_contig00024596
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00024596 (801 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]... 143 2e-54 ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]... 132 9e-54 gb|ABW74564.1| glutamate receptor 3 [Boechera divaricarpa] 81 1e-24 ref|XP_002336577.1| glutamate-gated kainate-type ion channel rec... 81 1e-24 gb|ABW81071.1| unknown [Cleome spinosa] 73 2e-24 >ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula] gi|355492304|gb|AES73507.1| Glutamate receptor 2.8 [Medicago truncatula] Length = 990 Score = 143 bits (361), Expect(2) = 2e-54 Identities = 77/177 (43%), Positives = 98/177 (55%), Gaps = 1/177 (0%) Frame = -3 Query: 637 WFNETSCLESNTEVSSNSSLGLESFWXXXXXXXXXXXXXXXXXAMTFLYQHRHVWLHYDP 458 WF E+ CL+SNTE+SSN+SLGLESFW +TFL+QH+H+WL+ +P Sbjct: 829 WFKESRCLDSNTEISSNNSLGLESFWGLFLIAGIASLLALLIFVVTFLHQHKHIWLNNNP 888 Query: 457 STSIWRRLGILLRIFDQRDMESHTFXXXXXXXXXXXXSPHH-GLGAVEAXXXXXXXXXXX 281 S SIWRR+ ++ R+FDQRD+ SHTF HH LGAVE Sbjct: 889 SNSIWRRIEVVFRMFDQRDLSSHTFKKTENINESSNNPYHHDDLGAVEVSPGTPYPPSPF 948 Query: 280 XXTESNFSFYGDSSPDHGSDAKPNGYAADCQDREMDAVQIINP*IAPVNKCKFNSQA 110 TESN SFYGD S Q+ +MD +QI NP ++PVN C+ NSQA Sbjct: 949 SQTESNVSFYGDFS----------------QNIDMDVMQITNPEVSPVNNCEINSQA 989 Score = 95.5 bits (236), Expect(2) = 2e-54 Identities = 47/55 (85%), Positives = 49/55 (89%), Gaps = 2/55 (3%) Frame = -2 Query: 800 FLGTYSCS--KYVMIEPRFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMRAIE 642 FLG YSCS KY M+EPRFKTGGFGYAFPKGSPLVADISRAIL+VTQG KMR IE Sbjct: 772 FLGIYSCSSSKYAMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGGKMRTIE 826 >ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula] gi|355492303|gb|AES73506.1| Glutamate receptor 2.8 [Medicago truncatula] Length = 1057 Score = 132 bits (332), Expect(2) = 9e-54 Identities = 72/173 (41%), Positives = 89/173 (51%) Frame = -3 Query: 637 WFNETSCLESNTEVSSNSSLGLESFWXXXXXXXXXXXXXXXXXAMTFLYQHRHVWLHYDP 458 W +TSCL+SNTE+SSN+SLGLESFW +TFLYQH+H+WL P Sbjct: 900 WLKKTSCLDSNTEISSNNSLGLESFWGLFLIAGIASLLALLIFVITFLYQHKHIWLPNSP 959 Query: 457 STSIWRRLGILLRIFDQRDMESHTFXXXXXXXXXXXXSPHHGLGAVEAXXXXXXXXXXXX 278 S SIWRR+ +L+ IFDQRD+ SHTF H GAVEA Sbjct: 960 SNSIWRRIRVLVMIFDQRDLNSHTFKKSGNKHESSNSPHHDDFGAVEASPGTHCPPSPSS 1019 Query: 277 XTESNFSFYGDSSPDHGSDAKPNGYAADCQDREMDAVQIINP*IAPVNKCKFN 119 TESN S GD SP + E+D VQI N ++PVN C+ + Sbjct: 1020 QTESNVSLNGDFSP----------------NTELDVVQITNQEVSPVNNCEID 1056 Score = 104 bits (260), Expect(2) = 9e-54 Identities = 48/53 (90%), Positives = 52/53 (98%) Frame = -2 Query: 800 FLGTYSCSKYVMIEPRFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMRAIE 642 FLGTYSCSKYVM+EPRFKTGGFGYAFPKGSPLVADISRAIL+VTQGD+M+ IE Sbjct: 845 FLGTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGDRMKTIE 897 >gb|ABW74564.1| glutamate receptor 3 [Boechera divaricarpa] Length = 954 Score = 80.9 bits (198), Expect(2) = 1e-24 Identities = 36/47 (76%), Positives = 41/47 (87%) Frame = -2 Query: 782 CSKYVMIEPRFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMRAIE 642 CSKYVM+EP FKT GFG+AFPK SPL D+SRAIL+VTQGD+MR IE Sbjct: 747 CSKYVMVEPTFKTAGFGFAFPKNSPLTGDVSRAILNVTQGDEMRRIE 793 Score = 58.5 bits (140), Expect(2) = 1e-24 Identities = 32/82 (39%), Positives = 41/82 (50%) Frame = -3 Query: 628 ETSCLESNTEVSSNSSLGLESFWXXXXXXXXXXXXXXXXXAMTFLYQHRHVWLHYDPSTS 449 + C + T +SSN L L SFW FLY+HRH L YD S Sbjct: 800 QNDCPDPKTALSSNR-LSLRSFWGLFLIAGIASFLALLVFVAIFLYEHRHT-LCYDSEYS 857 Query: 448 IWRRLGILLRIFDQRDMESHTF 383 +WR L L R FD++D++SHTF Sbjct: 858 MWRNLMFLFRAFDEKDIKSHTF 879 >ref|XP_002336577.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222836230|gb|EEE74651.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 387 Score = 80.9 bits (198), Expect(2) = 1e-24 Identities = 35/47 (74%), Positives = 43/47 (91%) Frame = -2 Query: 782 CSKYVMIEPRFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMRAIE 642 CS+Y MI+P+FKTGGFG+ FPKGSPLV DISRAIL+VT+GD+M+ IE Sbjct: 192 CSRYTMIDPKFKTGGFGFVFPKGSPLVPDISRAILNVTEGDEMKQIE 238 Score = 58.5 bits (140), Expect(2) = 1e-24 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = -3 Query: 637 WFNETS-CLESNTEVSSNSSLGLESFWXXXXXXXXXXXXXXXXXAMTFLYQHRHVWLHYD 461 WF + S C ES++ +SSNS L L+SFW + F+Y+ R+V YD Sbjct: 241 WFGKKSTCPESSSSISSNS-LSLKSFWGLFLLAGLAALLALIIFIVMFVYRERNVLRSYD 299 Query: 460 PSTSIWRRLGILLRIFDQRDMESHTF 383 + SIW R+ RIF QRD S TF Sbjct: 300 STASIWSRIENFFRIFIQRDSTSSTF 325 >gb|ABW81071.1| unknown [Cleome spinosa] Length = 986 Score = 72.8 bits (177), Expect(2) = 2e-24 Identities = 30/47 (63%), Positives = 38/47 (80%) Frame = -2 Query: 782 CSKYVMIEPRFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMRAIE 642 C+KY M+EP FKT GFG+ FPKGSPL D+S+AIL V +G++MR IE Sbjct: 758 CTKYTMVEPSFKTAGFGFVFPKGSPLTGDVSKAILDVNEGEEMRQIE 804 Score = 66.2 bits (160), Expect(2) = 2e-24 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = -3 Query: 640 EWFN-ETSCLESNTEVSSNSSLGLESFWXXXXXXXXXXXXXXXXXAMTFLYQHRHVWLHY 464 +WFN + +C + NT +SSNS L L SFW FL++ RH + Sbjct: 806 KWFNRQNNCSDPNTALSSNS-LSLSSFWGLFLIVGVASVLALLVFLAMFLFEQRHTLIQS 864 Query: 463 --DPSTSIWRRLGILLRIFDQRDMESHTF 383 +P S+WR+ +L+RIFDQ+DM SHTF Sbjct: 865 NDEPEHSMWRKWAVLVRIFDQKDMNSHTF 893