BLASTX nr result
ID: Glycyrrhiza24_contig00024595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00024595 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma... 125 3e-27 ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma... 122 2e-26 ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 112 4e-23 emb|CBI35690.3| unnamed protein product [Vitis vinifera] 112 4e-23 emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] 112 4e-23 >ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] Length = 958 Score = 125 bits (315), Expect = 3e-27 Identities = 57/80 (71%), Positives = 67/80 (83%) Frame = +1 Query: 1 KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180 KEFP+ SEPLHIEK WP HPSL SKVD+S+ SDR+FHE+ +RLPKEVHHRD+ SRL+ +L Sbjct: 608 KEFPVGSEPLHIEKRWPRHPSLFSKVDDSVSSDRVFHESHQRLPKEVHHRDDHSRLSQSL 667 Query: 181 SSYHSFSGDVIPLGSSSSNN 240 SSYHSF GD IPL SS +N Sbjct: 668 SSYHSFPGDDIPLSGSSYSN 687 >ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] Length = 960 Score = 122 bits (307), Expect = 2e-26 Identities = 56/80 (70%), Positives = 65/80 (81%) Frame = +1 Query: 1 KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180 KEFP+DSEP HIEK WP HPS SKV +SI SDR+FHE+ +RLPKEVHHRD+RSRL+ +L Sbjct: 609 KEFPVDSEPFHIEKRWPRHPSFFSKVGDSISSDRVFHESHQRLPKEVHHRDDRSRLSQSL 668 Query: 181 SSYHSFSGDVIPLGSSSSNN 240 SSYHS GD IPL SS +N Sbjct: 669 SSYHSLPGDDIPLSGSSYSN 688 >ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 [Vitis vinifera] Length = 860 Score = 112 bits (279), Expect = 4e-23 Identities = 53/79 (67%), Positives = 63/79 (79%) Frame = +1 Query: 1 KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180 KEFP+DS+ +HIEKH PHHPS KV++S SDRI HEN +RL KEV HRD+R RLNH+L Sbjct: 598 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 656 Query: 181 SSYHSFSGDVIPLGSSSSN 237 YHSFSG+ +PLG SSSN Sbjct: 657 PGYHSFSGEEVPLGRSSSN 675 >emb|CBI35690.3| unnamed protein product [Vitis vinifera] Length = 788 Score = 112 bits (279), Expect = 4e-23 Identities = 53/79 (67%), Positives = 63/79 (79%) Frame = +1 Query: 1 KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180 KEFP+DS+ +HIEKH PHHPS KV++S SDRI HEN +RL KEV HRD+R RLNH+L Sbjct: 598 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 656 Query: 181 SSYHSFSGDVIPLGSSSSN 237 YHSFSG+ +PLG SSSN Sbjct: 657 PGYHSFSGEEVPLGRSSSN 675 >emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] Length = 894 Score = 112 bits (279), Expect = 4e-23 Identities = 53/79 (67%), Positives = 63/79 (79%) Frame = +1 Query: 1 KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180 KEFP+DS+ +HIEKH PHHPS KV++S SDRI HEN +RL KEV HRD+R RLNH+L Sbjct: 579 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 637 Query: 181 SSYHSFSGDVIPLGSSSSN 237 YHSFSG+ +PLG SSSN Sbjct: 638 PGYHSFSGEEVPLGRSSSN 656