BLASTX nr result

ID: Glycyrrhiza24_contig00024595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024595
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   125   3e-27
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...   122   2e-26
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   112   4e-23
emb|CBI35690.3| unnamed protein product [Vitis vinifera]              112   4e-23
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]   112   4e-23

>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/80 (71%), Positives = 67/80 (83%)
 Frame = +1

Query: 1   KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180
           KEFP+ SEPLHIEK WP HPSL SKVD+S+ SDR+FHE+ +RLPKEVHHRD+ SRL+ +L
Sbjct: 608 KEFPVGSEPLHIEKRWPRHPSLFSKVDDSVSSDRVFHESHQRLPKEVHHRDDHSRLSQSL 667

Query: 181 SSYHSFSGDVIPLGSSSSNN 240
           SSYHSF GD IPL  SS +N
Sbjct: 668 SSYHSFPGDDIPLSGSSYSN 687


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/80 (70%), Positives = 65/80 (81%)
 Frame = +1

Query: 1   KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180
           KEFP+DSEP HIEK WP HPS  SKV +SI SDR+FHE+ +RLPKEVHHRD+RSRL+ +L
Sbjct: 609 KEFPVDSEPFHIEKRWPRHPSFFSKVGDSISSDRVFHESHQRLPKEVHHRDDRSRLSQSL 668

Query: 181 SSYHSFSGDVIPLGSSSSNN 240
           SSYHS  GD IPL  SS +N
Sbjct: 669 SSYHSLPGDDIPLSGSSYSN 688


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180
           KEFP+DS+ +HIEKH PHHPS   KV++S  SDRI HEN +RL KEV HRD+R RLNH+L
Sbjct: 598 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 656

Query: 181 SSYHSFSGDVIPLGSSSSN 237
             YHSFSG+ +PLG SSSN
Sbjct: 657 PGYHSFSGEEVPLGRSSSN 675


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180
           KEFP+DS+ +HIEKH PHHPS   KV++S  SDRI HEN +RL KEV HRD+R RLNH+L
Sbjct: 598 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 656

Query: 181 SSYHSFSGDVIPLGSSSSN 237
             YHSFSG+ +PLG SSSN
Sbjct: 657 PGYHSFSGEEVPLGRSSSN 675


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   KEFPIDSEPLHIEKHWPHHPSLSSKVDNSIPSDRIFHENLRRLPKEVHHRDERSRLNHTL 180
           KEFP+DS+ +HIEKH PHHPS   KV++S  SDRI HEN +RL KEV HRD+R RLNH+L
Sbjct: 579 KEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHEN-QRLSKEVLHRDDRLRLNHSL 637

Query: 181 SSYHSFSGDVIPLGSSSSN 237
             YHSFSG+ +PLG SSSN
Sbjct: 638 PGYHSFSGEEVPLGRSSSN 656


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