BLASTX nr result

ID: Glycyrrhiza24_contig00024581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024581
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   137   7e-31
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   130   1e-28
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...    72   6e-11
ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...    61   1e-07
dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]           60   2e-07

>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  137 bits (346), Expect = 7e-31
 Identities = 74/114 (64%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3    FREAARACEEDSSGWASSAFPTNDARSRPGCRIQSFGKQKSSISDFTKPXXXXXXXXXXX 182
            FREAAR CEEDSSGWASSAFPTNDARSR G RIQS GKQKSS+SD +KP           
Sbjct: 1896 FREAARVCEEDSSGWASSAFPTNDARSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMD 1955

Query: 183  XXEMHHHQAEPLFQSMPSLKDLTFDPALSTMDEFGSDVYSNL-PFDLNGESFLE 341
              EMHHHQA+  FQSMPSLKDL  D    T DE G D   ++  FDLNGES LE
Sbjct: 1956 PSEMHHHQADSKFQSMPSLKDLRIDLTSLTTDEVGIDSMGSIFSFDLNGESSLE 2009


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/114 (61%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3    FREAARACEEDSSGWASSAFPTNDARSRPGCRIQSFGKQKSSISDFTKPXXXXXXXXXXX 182
            FREAAR C EDSSGWASSAFPTND RSRPG R+QS GK+KSS+SD +KP           
Sbjct: 1912 FREAARVCGEDSSGWASSAFPTNDTRSRPGSRLQSSGKRKSSVSDSSKPSRSKSKKASMD 1971

Query: 183  XXEMHHHQAEPLFQSMPSLKDLTFDPALSTMDEFGSD-VYSNLPFDLNGESFLE 341
              EMH +QA+ +FQSMPSLKDL  D    T DE G D + S   FDLNGES LE
Sbjct: 1972 RSEMHPYQADSMFQSMPSLKDLRIDLTSLTTDEVGIDGMDSIFSFDLNGESSLE 2025


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = +3

Query: 3    FREAARACEEDSSGWASSAFPTNDARSRPGCRIQSFGKQKSSISDFTKPXXXXXXXXXXX 182
            FR+AARAC+E   GWASSAFP ND + RPG + QS GK K S+ D  KP           
Sbjct: 1880 FRDAARACDEGGLGWASSAFPANDIKLRPGPKPQSLGKHKPSLPDTVKPPRSKLKRTLEH 1939

Query: 183  XXEMHHHQAEPLFQS----MPSLKDLTFD--PALSTMDEFGSDVY 299
                 +  AEP+FQS     P   +L FD  PA+   D + +D Y
Sbjct: 1940 GEIHQYLLAEPVFQSPHAVSPRDPNLKFDLTPAV-LQDGWTNDTY 1983


>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840611|gb|EEE78158.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1682

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
 Frame = +3

Query: 3    FREAARACEEDSSGWASSAFPTNDARSRPGCRIQSFGKQKSSISDFTKPXXXXXXXXXXX 182
            FR+AARAC E   GW SS+ P ND + R   + QS GK K S+S+ TKP           
Sbjct: 1538 FRDAARACVEGDLGWVSSSAPANDFKLRLPSKTQSLGKHKLSVSESTKPPRSKMKKTLIE 1597

Query: 183  XXEMHHHQAEPLFQSMPSLK----DLTFD-PALSTMDEFGSDVYS 302
              + H   AEP+ Q +P L     +L FD P ++  D+   D YS
Sbjct: 1598 HSQGHLF-AEPVSQPLPVLSSRDPNLRFDLPPIAIQDD--KDEYS 1639


>dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]
          Length = 2061

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/48 (58%), Positives = 32/48 (66%)
 Frame = +3

Query: 3    FREAARACEEDSSGWASSAFPTNDARSRPGCRIQSFGKQKSSISDFTK 146
            +R AA AC EDS GWAS+ FP ND +SR G + QS GK K S SD  K
Sbjct: 1932 YRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGKHKLSASDSAK 1979


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