BLASTX nr result

ID: Glycyrrhiza24_contig00024570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024570
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat...   285   3e-75
ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat...   282   2e-74
ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...   247   8e-64
emb|CBI41047.3| unnamed protein product [Vitis vinifera]              247   8e-64
emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]   247   8e-64

>ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 628

 Score =  285 bits (729), Expect = 3e-75
 Identities = 139/159 (87%), Positives = 145/159 (91%)
 Frame = +2

Query: 2   IDTFVIMINGFLEQGCLVEACEYFKDMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDT 181
           IDTFVIMINGFLEQGCLVEACEYFK+MVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKD 
Sbjct: 445 IDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDA 504

Query: 182 WNCITASKGCELNVSAWTIWIHALFSKGHVKEACTFCIXXXXXXXXXXXXTFAKLMRGLR 361
           WNCITASKGC+LNVSAWTIWIHALFSKGHVKEAC+FCI            TFAKLMRGL+
Sbjct: 505 WNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLK 564

Query: 362 KLYNRAFAAEITEKVRKMAADRQITFKMYKRRGERDLKK 478
           KLYNR FAAEITEKVRKMAADR+ITFKMYKRRGERDLK+
Sbjct: 565 KLYNREFAAEITEKVRKMAADRKITFKMYKRRGERDLKE 603


>ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 654

 Score =  282 bits (721), Expect = 2e-74
 Identities = 137/159 (86%), Positives = 143/159 (89%)
 Frame = +2

Query: 2   IDTFVIMINGFLEQGCLVEACEYFKDMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDT 181
           +DTFVIMINGFLEQGCLVEACEYFK+MVGRGLF APQYGTLKELMNSLLRAEKLEMAKD 
Sbjct: 471 MDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDA 530

Query: 182 WNCITASKGCELNVSAWTIWIHALFSKGHVKEACTFCIXXXXXXXXXXXXTFAKLMRGLR 361
           WNCITASKGC+LNVSAWTIWIHALFSKGHVKEAC+FCI            TFAKLM GL+
Sbjct: 531 WNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLK 590

Query: 362 KLYNRAFAAEITEKVRKMAADRQITFKMYKRRGERDLKK 478
           KLYNR FAAEITEKVRKMAADRQITFKMYKRRGERDLK+
Sbjct: 591 KLYNRQFAAEITEKVRKMAADRQITFKMYKRRGERDLKE 629


>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  247 bits (630), Expect = 8e-64
 Identities = 119/159 (74%), Positives = 137/159 (86%)
 Frame = +2

Query: 2   IDTFVIMINGFLEQGCLVEACEYFKDMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDT 181
           +DTFVIMI+GFL Q CLVEACE+FK+MVGRGL +APQYGTLKEL+NSLLRAEKLEM+KD 
Sbjct: 437 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 496

Query: 182 WNCITASKGCELNVSAWTIWIHALFSKGHVKEACTFCIXXXXXXXXXXXXTFAKLMRGLR 361
           W+CI  +KGC+LNV AWTIWIHALFS GHVKEAC++C+            TFAKLMRGLR
Sbjct: 497 WSCIM-TKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLR 555

Query: 362 KLYNRAFAAEITEKVRKMAADRQITFKMYKRRGERDLKK 478
           KLYNR  AAEITEKVRKMAA+R++TFKMYKRRGER+LK+
Sbjct: 556 KLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKE 594


>emb|CBI41047.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  247 bits (630), Expect = 8e-64
 Identities = 119/159 (74%), Positives = 137/159 (86%)
 Frame = +2

Query: 2   IDTFVIMINGFLEQGCLVEACEYFKDMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDT 181
           +DTFVIMI+GFL Q CLVEACE+FK+MVGRGL +APQYGTLKEL+NSLLRAEKLEM+KD 
Sbjct: 329 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 388

Query: 182 WNCITASKGCELNVSAWTIWIHALFSKGHVKEACTFCIXXXXXXXXXXXXTFAKLMRGLR 361
           W+CI  +KGC+LNV AWTIWIHALFS GHVKEAC++C+            TFAKLMRGLR
Sbjct: 389 WSCIM-TKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLR 447

Query: 362 KLYNRAFAAEITEKVRKMAADRQITFKMYKRRGERDLKK 478
           KLYNR  AAEITEKVRKMAA+R++TFKMYKRRGER+LK+
Sbjct: 448 KLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKE 486


>emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score =  247 bits (630), Expect = 8e-64
 Identities = 119/159 (74%), Positives = 137/159 (86%)
 Frame = +2

Query: 2   IDTFVIMINGFLEQGCLVEACEYFKDMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDT 181
           +DTFVIMI+GFL Q CLVEACE+FK+MVGRGL +APQYGTLKEL+NSLLRAEKLEM+KD 
Sbjct: 470 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 529

Query: 182 WNCITASKGCELNVSAWTIWIHALFSKGHVKEACTFCIXXXXXXXXXXXXTFAKLMRGLR 361
           W+CI  +KGC+LNV AWTIWIHALFS GHVKEAC++C+            TFAKLMRGLR
Sbjct: 530 WSCIM-TKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLR 588

Query: 362 KLYNRAFAAEITEKVRKMAADRQITFKMYKRRGERDLKK 478
           KLYNR  AAEITEKVRKMAA+R++TFKMYKRRGER+LK+
Sbjct: 589 KLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKE 627


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