BLASTX nr result

ID: Glycyrrhiza24_contig00024564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024564
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531168.1| PREDICTED: uncharacterized protein LOC100805...   184   8e-45
ref|XP_003531802.1| PREDICTED: uncharacterized protein LOC100790...   174   5e-42
ref|XP_003524873.1| PREDICTED: uncharacterized protein LOC100787...   174   7e-42
gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]                  116   2e-24
gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]                116   2e-24

>ref|XP_003531168.1| PREDICTED: uncharacterized protein LOC100805128 [Glycine max]
          Length = 540

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/133 (72%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   SSRTSPSRLEDAEFVNSLLSS---NLDDEVTSPSLDVVSLKPLSDTVLDQRQNEQSSYEP 172
           SSRTSPSR+EDAEFVNSLL S   NLDDEVTSPSLDV+SLKP SD VLD+RQN Q SYEP
Sbjct: 39  SSRTSPSRIEDAEFVNSLLGSKNDNLDDEVTSPSLDVLSLKPSSDAVLDRRQNGQISYEP 98

Query: 173 KEKIPRENGDVGRVKMQHFQKVDPGSSSTIHPVRTTEDEXXXXXXXXXXXXFEFDKGERP 352
           KE +P+EN D GRVKMQHFQKVD GSSS IH VR  EDE            FEFDKGERP
Sbjct: 99  KETMPKENSDTGRVKMQHFQKVDTGSSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERP 158

Query: 353 VNKPATRSLLRPI 391
            N PATRSL RPI
Sbjct: 159 GNNPATRSLFRPI 171


>ref|XP_003531802.1| PREDICTED: uncharacterized protein LOC100790482 [Glycine max]
          Length = 540

 Score =  174 bits (442), Expect = 5e-42
 Identities = 93/133 (69%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   SSRTSPSRLEDAEFVNSLLSS---NLDDEVTSPSLDVVSLKPLSDTVLDQRQNEQSSYEP 172
           SSRTSPSR+EDAEFVNSLL S   NLDDEVTSPSLDV+SLKP SD VLD+RQN Q SYE 
Sbjct: 39  SSRTSPSRIEDAEFVNSLLGSKNDNLDDEVTSPSLDVLSLKPSSDAVLDRRQNGQISYEA 98

Query: 173 KEKIPRENGDVGRVKMQHFQKVDPGSSSTIHPVRTTEDEXXXXXXXXXXXXFEFDKGERP 352
           KE + +EN + GRVKMQHFQKVD G+SS IH VR  EDE            FEFDKGERP
Sbjct: 99  KETMAKENSNTGRVKMQHFQKVDTGNSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERP 158

Query: 353 VNKPATRSLLRPI 391
            N PATRSL RPI
Sbjct: 159 GNNPATRSLFRPI 171


>ref|XP_003524873.1| PREDICTED: uncharacterized protein LOC100787239 [Glycine max]
          Length = 540

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/133 (68%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   SSRTSPSRLEDAEFVNSLLSS---NLDDEVTSPSLDVVSLKPLSDTVLDQRQNEQSSYEP 172
           SSRTSPSR+EDAEFVNSLL S   NLDDEVTSPSLDV+SLKP S+ +LD++QN Q SYEP
Sbjct: 39  SSRTSPSRIEDAEFVNSLLDSKNDNLDDEVTSPSLDVLSLKPSSNALLDRKQNGQISYEP 98

Query: 173 KEKIPRENGDVGRVKMQHFQKVDPGSSSTIHPVRTTEDEXXXXXXXXXXXXFEFDKGERP 352
           KE +P+ENGD+GR K  HF KVD GSSS IH VR  EDE            FEFDKGERP
Sbjct: 99  KETMPKENGDMGRAKTHHFPKVDTGSSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERP 158

Query: 353 VNKPATRSLLRPI 391
            N PATRSL RPI
Sbjct: 159 GNNPATRSLFRPI 171


>gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]
          Length = 541

 Score =  116 bits (290), Expect = 2e-24
 Identities = 70/135 (51%), Positives = 88/135 (65%), Gaps = 5/135 (3%)
 Frame = +2

Query: 2   SSRTSPSRLEDAEFV-NSLLSSN---LDDEVTSPSLDVVSLKPLSDTVLDQRQN-EQSSY 166
           SSRTSP++L+D+EFV NSLL+SN    D+EV +PSLDV S K   + VLD  Q  +Q+S 
Sbjct: 38  SSRTSPAKLDDSEFVRNSLLASNGGDFDEEVAAPSLDVASEKAGREVVLDNNQGGDQASC 97

Query: 167 EPKEKIPRENGDVGRVKMQHFQKVDPGSSSTIHPVRTTEDEXXXXXXXXXXXXFEFDKGE 346
           + KE +PRE+ DVGR KMQ F KVD G+S+ IHP+R  EDE            FEF KGE
Sbjct: 98  QLKEAMPRESADVGRSKMQ-FLKVDSGNSNAIHPMRVFEDENLDYDSNASSSSFEFHKGE 156

Query: 347 RPVNKPATRSLLRPI 391
           R V+    RS  RP+
Sbjct: 157 RSVHNSIARSFSRPM 171


>gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]
          Length = 249

 Score =  116 bits (290), Expect = 2e-24
 Identities = 70/135 (51%), Positives = 88/135 (65%), Gaps = 5/135 (3%)
 Frame = +2

Query: 2   SSRTSPSRLEDAEFV-NSLLSSN---LDDEVTSPSLDVVSLKPLSDTVLDQRQN-EQSSY 166
           SSRTSP++L+D+EFV NSLL+SN    D+EV +PSLDV S K   + VLD  Q  +Q+S 
Sbjct: 38  SSRTSPAKLDDSEFVRNSLLASNGGDFDEEVAAPSLDVASEKAGREVVLDNNQGGDQASC 97

Query: 167 EPKEKIPRENGDVGRVKMQHFQKVDPGSSSTIHPVRTTEDEXXXXXXXXXXXXFEFDKGE 346
           + KE +PRE+ DVGR KMQ F KVD G+S+ IHP+R  EDE            FEF KGE
Sbjct: 98  QLKEAMPRESADVGRSKMQ-FLKVDSGNSNAIHPMRVFEDENLDYDSNASSSSFEFHKGE 156

Query: 347 RPVNKPATRSLLRPI 391
           R V+    RS  RP+
Sbjct: 157 RSVHNSIARSFSRPM 171


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