BLASTX nr result

ID: Glycyrrhiza24_contig00024560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024560
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529382.1| Endosomal P24A protein precursor, putative [...   168   5e-40
ref|XP_002308404.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_003550684.1| PREDICTED: transmembrane 9 superfamily membe...   164   9e-39
ref|XP_003518221.1| PREDICTED: transmembrane 9 superfamily membe...   163   1e-38
ref|XP_002325132.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38

>ref|XP_002529382.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223531130|gb|EEF32978.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 640

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/129 (64%), Positives = 87/129 (67%)
 Frame = +1

Query: 1   VFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITVVLCYFQLCSEDYLWWWRSYL 180
           VFIELFFILTSIWLHQ                 TCAEIT+VLCYFQLCSEDYLWWWRSYL
Sbjct: 512 VFIELFFILTSIWLHQFYYIFGFLFIVFIILLVTCAEITIVLCYFQLCSEDYLWWWRSYL 571

Query: 181 TSGSSXXXXXXXXXXXXXTKLEITKPVSGVLYFGYMLLLSXXXXXXXXXXXXYACFWFTR 360
           TSGSS             TKLEITKPVSG+LYFGYML++S            YACFWFTR
Sbjct: 572 TSGSSALYLFLYAAFYFFTKLEITKPVSGILYFGYMLIVSYAFFVLTGAIGFYACFWFTR 631

Query: 361 LIYSSVKID 387
           LIYSSVKID
Sbjct: 632 LIYSSVKID 640


>ref|XP_002308404.1| predicted protein [Populus trichocarpa] gi|222854380|gb|EEE91927.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/129 (64%), Positives = 86/129 (66%)
 Frame = +1

Query: 1   VFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITVVLCYFQLCSEDYLWWWRSYL 180
           VFIELFFILTSIWLHQ                 TCAEIT+VLCYFQLCSEDYLWWWRSYL
Sbjct: 517 VFIELFFILTSIWLHQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYL 576

Query: 181 TSGSSXXXXXXXXXXXXXTKLEITKPVSGVLYFGYMLLLSXXXXXXXXXXXXYACFWFTR 360
           TSGSS             TKL+ITKPVSGVLYFGYML+ S            YACFWFTR
Sbjct: 577 TSGSSALYLFLYAAFYFFTKLDITKPVSGVLYFGYMLIASYAFFVLTGTIGFYACFWFTR 636

Query: 361 LIYSSVKID 387
           LIYSSVKID
Sbjct: 637 LIYSSVKID 645


>ref|XP_003550684.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 642

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/129 (62%), Positives = 86/129 (66%)
 Frame = +1

Query: 1   VFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITVVLCYFQLCSEDYLWWWRSYL 180
           VFIELFFILTSIWLHQ                 TCAEIT+VLCYF+LCSEDY WWWRSYL
Sbjct: 514 VFIELFFILTSIWLHQFYYIFGFLFIVFVILIITCAEITIVLCYFRLCSEDYNWWWRSYL 573

Query: 181 TSGSSXXXXXXXXXXXXXTKLEITKPVSGVLYFGYMLLLSXXXXXXXXXXXXYACFWFTR 360
           TSGSS             TKLEI+KP+SG+LYFGYMLLLS            YACFWFTR
Sbjct: 574 TSGSSALYLFLYAVFYFFTKLEISKPISGILYFGYMLLLSYAFFVLTGTIGFYACFWFTR 633

Query: 361 LIYSSVKID 387
           LIYSSVKID
Sbjct: 634 LIYSSVKID 642


>ref|XP_003518221.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 642

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/129 (62%), Positives = 86/129 (66%)
 Frame = +1

Query: 1   VFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITVVLCYFQLCSEDYLWWWRSYL 180
           VFIELFFILTSIWLHQ                 TCAEIT+VLCYFQLCSE+Y WWWRSYL
Sbjct: 514 VFIELFFILTSIWLHQFYYIFGFLFIVFVILIITCAEITIVLCYFQLCSENYNWWWRSYL 573

Query: 181 TSGSSXXXXXXXXXXXXXTKLEITKPVSGVLYFGYMLLLSXXXXXXXXXXXXYACFWFTR 360
           TSGSS             TKLEI+KP+SG+LYFGYMLLLS            YACFWFTR
Sbjct: 574 TSGSSALYLFLYAVFYFFTKLEISKPISGILYFGYMLLLSYTFFVLTGTIGFYACFWFTR 633

Query: 361 LIYSSVKID 387
           LIYSSVKID
Sbjct: 634 LIYSSVKID 642


>ref|XP_002325132.1| predicted protein [Populus trichocarpa] gi|222866566|gb|EEF03697.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/129 (62%), Positives = 85/129 (65%)
 Frame = +1

Query: 1   VFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITVVLCYFQLCSEDYLWWWRSYL 180
           VFIELFFILTSIWLHQ                 TCAEIT+VLCYFQLC EDYLWWWRSYL
Sbjct: 517 VFIELFFILTSIWLHQFYYIFGFLFIVFVILIVTCAEITIVLCYFQLCGEDYLWWWRSYL 576

Query: 181 TSGSSXXXXXXXXXXXXXTKLEITKPVSGVLYFGYMLLLSXXXXXXXXXXXXYACFWFTR 360
           TSGSS             TKL+ITKPVSG+LYFGYML+ S            YACFWFTR
Sbjct: 577 TSGSSAIYLFLYAAFYFFTKLDITKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTR 636

Query: 361 LIYSSVKID 387
           L+YSSVKID
Sbjct: 637 LMYSSVKID 645


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