BLASTX nr result

ID: Glycyrrhiza24_contig00024536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024536
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588875.1| Folate-Biopterin Transporter (FBT) family [M...   126   2e-27
ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794...   124   8e-27
ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806...   120   1e-25
ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|NP_196643.1| major facilitator protein [Arabidopsis thaliana...   109   3e-22

>ref|XP_003588875.1| Folate-Biopterin Transporter (FBT) family [Medicago truncatula]
           gi|355477923|gb|AES59126.1| Folate-Biopterin Transporter
           (FBT) family [Medicago truncatula]
          Length = 466

 Score =  126 bits (316), Expect = 2e-27
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = +3

Query: 210 LTEGIEWVRMLTWKLNPTFIAGVFLVYGVGQGFSGSIFKVVSDYYWKDVQKVQPSTVQLY 389
           LTE IEW+ MLT  LNPTFIAG+FLVYG+GQGF+GS+FK+V+DYYWKDVQK+QPSTVQLY
Sbjct: 24  LTEPIEWLTMLTNNLNPTFIAGIFLVYGIGQGFTGSLFKLVTDYYWKDVQKLQPSTVQLY 83

Query: 390 VGLYLIPWVL 419
           VG+Y IPW+L
Sbjct: 84  VGIYFIPWIL 93


>ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794191 [Glycine max]
          Length = 511

 Score =  124 bits (311), Expect = 8e-27
 Identities = 53/70 (75%), Positives = 64/70 (91%)
 Frame = +3

Query: 210 LTEGIEWVRMLTWKLNPTFIAGVFLVYGVGQGFSGSIFKVVSDYYWKDVQKVQPSTVQLY 389
           LTE I+W++ L+ +LNPTF+ GVF++YG+GQGFSGS+FKVVSDYYWKDVQK+QPSTVQLY
Sbjct: 40  LTEPIQWIQSLSSQLNPTFVIGVFIIYGIGQGFSGSLFKVVSDYYWKDVQKIQPSTVQLY 99

Query: 390 VGLYLIPWVL 419
           VG Y IPWVL
Sbjct: 100 VGFYFIPWVL 109


>ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max]
          Length = 523

 Score =  120 bits (300), Expect = 1e-25
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = +3

Query: 210 LTEGIEWVRMLTWKLNPTFIAGVFLVYGVGQGFSGSIFKVVSDYYWKDVQKVQPSTVQLY 389
           LTE  +W++ L+ +LNPTF+ GVFL+YG+GQGFSGS+FKVV+DYYWKDVQK+QP TVQLY
Sbjct: 53  LTEPFQWIQKLSSQLNPTFVIGVFLIYGIGQGFSGSLFKVVADYYWKDVQKIQPFTVQLY 112

Query: 390 VGLYLIPWVL 419
           VG Y IPWVL
Sbjct: 113 VGFYFIPWVL 122


>ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/77 (66%), Positives = 64/77 (83%), Gaps = 3/77 (3%)
 Frame = +3

Query: 198 RRNPLT---EGIEWVRMLTWKLNPTFIAGVFLVYGVGQGFSGSIFKVVSDYYWKDVQKVQ 368
           R +PL+   E  +W++ML+ +LNPTFI GV +VYG+ QGFSGS FKVV+D+YWKDVQKVQ
Sbjct: 39  RASPLSIFMEPFQWLQMLSSQLNPTFIFGVVVVYGLSQGFSGSFFKVVTDFYWKDVQKVQ 98

Query: 369 PSTVQLYVGLYLIPWVL 419
           PS VQLY+GLY IPWV+
Sbjct: 99  PSAVQLYIGLYYIPWVM 115


>ref|NP_196643.1| major facilitator protein [Arabidopsis thaliana]
           gi|75173996|sp|Q9LEV7.1|FBT6_ARATH RecName:
           Full=Probable folate-biopterin transporter 6
           gi|8979716|emb|CAB96837.1| putative protein [Arabidopsis
           thaliana] gi|332004217|gb|AED91600.1| major facilitator
           protein [Arabidopsis thaliana]
          Length = 503

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
 Frame = +3

Query: 186 KATRRRNP----LTEGIEWVRMLTWKLNPTFIAGVFLVYGVGQGFSGSIFKVVSDYYWKD 353
           K   RRN     L +  +W++ML+ +LN +F+ GV LVYGV QGFSGSIFKVV+DYYWKD
Sbjct: 27  KTKARRNAVVSVLIQPFQWLQMLSSRLNLSFVLGVVLVYGVNQGFSGSIFKVVTDYYWKD 86

Query: 354 VQKVQPSTVQLYVGLYLIPWVL 419
           VQ+VQPS VQLY+GLY IPWV+
Sbjct: 87  VQQVQPSVVQLYMGLYYIPWVM 108


Top