BLASTX nr result

ID: Glycyrrhiza24_contig00024535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024535
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143374.1| PREDICTED: protein ROS1-like [Cucumis sativus]     87   2e-19
ref|XP_002881450.1| hypothetical protein ARALYDRAFT_482629 [Arab...    96   1e-17
emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]    96   1e-17
ref|XP_003555462.1| PREDICTED: transcriptional activator DEMETER...    95   2e-17
emb|CBI30244.3| unnamed protein product [Vitis vinifera]               95   2e-17

>ref|XP_004143374.1| PREDICTED: protein ROS1-like [Cucumis sativus]
          Length = 1782

 Score = 87.0 bits (214), Expect(2) = 2e-19
 Identities = 46/87 (52%), Positives = 61/87 (70%)
 Frame = +2

Query: 203  TKRFYKWMETSKVQLLLEGTDKEMEKWWEEERNVFRGRADSFIARMHLVQGTIHHTRNIK 382
            T R +K +  +  + L+EG+D+  +KWWEEER+VF GR DSFIA+MHL+QG    ++   
Sbjct: 741  TVRVWKLLMDNSNKELVEGSDEAKDKWWEEERSVFSGRTDSFIAKMHLIQGDRGFSQWKG 800

Query: 383  YQEASVIGVFLTQNVSDHLSR*ACISV 463
                SVIGVFLTQNVSDHLS  A +S+
Sbjct: 801  SVLDSVIGVFLTQNVSDHLSSSAFMSL 827



 Score = 35.0 bits (79), Expect(2) = 2e-19
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 567 LCSSAFMSLAARFPLKSKS 623
           L SSAFMSLAAR+PLKSKS
Sbjct: 819 LSSSAFMSLAARYPLKSKS 837


>ref|XP_002881450.1| hypothetical protein ARALYDRAFT_482629 [Arabidopsis lyrata subsp.
           lyrata] gi|297327289|gb|EFH57709.1| hypothetical protein
           ARALYDRAFT_482629 [Arabidopsis lyrata subsp. lyrata]
          Length = 1432

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 49/80 (61%), Positives = 58/80 (72%)
 Frame = +2

Query: 251 LEGTDKEMEKWWEEERNVFRGRADSFIARMHLVQGTIHHTRNIKYQEASVIGVFLTQNVS 430
           ++G+D++  KWWEEERNVFRGRADSFIARMHLVQG    T        SV+GVFLTQNVS
Sbjct: 555 VDGSDEQKAKWWEEERNVFRGRADSFIARMHLVQGDRRFTPWKGSVVDSVVGVFLTQNVS 614

Query: 431 DHLSR*ACISVIGVFLAPDV 490
           DHLS  A +S+   F AP +
Sbjct: 615 DHLSSSAFMSLAAEFPAPSI 634


>emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
          Length = 1824

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 54/92 (58%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
 Frame = +2

Query: 227  ETSKVQLLL---------EGTDKEMEKWWEEERNVFRGRADSFIARMHLVQGTIHHTRNI 379
            ETS+V  LL         +GTD+E  KWWEEERNVFRGRADSFIARMHLVQG    ++  
Sbjct: 794  ETSRVWKLLMGNINSEGIDGTDEEKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSKWX 853

Query: 380  KYQEASVIGVFLTQNVSDHLSR*ACISVIGVF 475
                 SV+GVFLTQNVSDHLS  A +S+   F
Sbjct: 854  GSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHF 885


>ref|XP_003555462.1| PREDICTED: transcriptional activator DEMETER-like [Glycine max]
          Length = 1851

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/75 (65%), Positives = 55/75 (73%)
 Frame = +2

Query: 251  LEGTDKEMEKWWEEERNVFRGRADSFIARMHLVQGTIHHTRNIKYQEASVIGVFLTQNVS 430
            LEGTDKE EKWW+EERNVF GR DSFIARMHL+QG    ++       SVIGVFLTQNVS
Sbjct: 817  LEGTDKEKEKWWDEERNVFHGRVDSFIARMHLIQGDRRFSKWKGSVVDSVIGVFLTQNVS 876

Query: 431  DHLSR*ACISVIGVF 475
            DHLS  A +S+   F
Sbjct: 877  DHLSSSAFMSLASRF 891



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 60/122 (49%), Positives = 66/122 (54%), Gaps = 25/122 (20%)
 Frame = +3

Query: 567  LCSSAFMSLAARFPLKSKSS--------NTLVEVPEFCVVKPADRIT-YGRGT------- 698
            L SSAFMSLA+RFPL+SKSS        NTL++    C+V PAD IT YG GT       
Sbjct: 879  LSSSAFMSLASRFPLQSKSSKKSYDVDTNTLLKEAGLCIVNPADTITPYGSGTLNQPTYH 938

Query: 699  ---------GELWRDSETSRINESLIKPNXXXXXXXXXXXXXXXXXXITQDARIKSSSGS 851
                      ELWRDSETSR   SLIKPN                  ITQDAR +SSSGS
Sbjct: 939  LCFETPHHARELWRDSETSRPKGSLIKPNNQSSEEEFLSPQDSLDSSITQDARNRSSSGS 998

Query: 852  NS 857
            NS
Sbjct: 999  NS 1000



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +1

Query: 88  LVPNILSNSIET-KGSKRKYCNSSDNQHESARSPLDTSLYQEILQVDGNFKGATLA 252
           LVPNILSNSIE  KGSKRKY   +  QH+SA +  DTSL QE LQ + NF+GAT A
Sbjct: 596 LVPNILSNSIEAAKGSKRKYRKRTQKQHDSATNSHDTSLCQETLQANENFRGATPA 651


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 54/92 (58%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
 Frame = +2

Query: 227 ETSKVQLLL---------EGTDKEMEKWWEEERNVFRGRADSFIARMHLVQGTIHHTRNI 379
           ETS+V  LL         +GTD+E  KWWEEERNVFRGRADSFIARMHLVQG    ++  
Sbjct: 625 ETSRVWKLLMGNINSEGIDGTDEEKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSKWK 684

Query: 380 KYQEASVIGVFLTQNVSDHLSR*ACISVIGVF 475
                SV+GVFLTQNVSDHLS  A +S+   F
Sbjct: 685 GSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHF 716


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