BLASTX nr result

ID: Glycyrrhiza24_contig00024517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024517
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    85   5e-15
ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    70   2e-10
ref|XP_003630152.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    68   9e-10
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    66   3e-09
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               65   4e-09

>ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 563

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = -2

Query: 159 RDGKASIPITLPWSFGRHSGS-EKPLLVPGLQNLENNCFLNVVLQALASCFCFQ 1
           +D K +IP TLPWSF   + S EK L VPGLQNL+NNCFLNVVLQALASCFCFQ
Sbjct: 29  KDAKVAIPFTLPWSFATDNSSFEKSLFVPGLQNLQNNCFLNVVLQALASCFCFQ 82


>ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 549

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/53 (66%), Positives = 39/53 (73%)
 Frame = -2

Query: 159 RDGKASIPITLPWSFGRHSGSEKPLLVPGLQNLENNCFLNVVLQALASCFCFQ 1
           +D K +IP T       +S  EK L VPGLQNL+NNCFLNVVLQALASCFCFQ
Sbjct: 22  KDTKVAIPFTFA---ADNSSFEKSLFVPGLQNLQNNCFLNVVLQALASCFCFQ 71


>ref|XP_003630152.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355524174|gb|AET04628.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 406

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
 Frame = -2

Query: 234 NWTLASTIRXXXXXXXXXXXXXXXL---RDGKASIPITLPWS-------FGRHSGSEKPL 85
           NWTL+S+ R               +   +D K+S PI   +S       + + + S+KP+
Sbjct: 10  NWTLSSSTRIRVAAVTAIAAIAASVLALKDAKSSKPIRSRFSLASLLPDYNQDNHSDKPI 69

Query: 84  LVPGLQNLENNCFLNVVLQALASCFCFQ 1
            VPGL+NL NNCFLNVVLQALASC CFQ
Sbjct: 70  FVPGLRNLGNNCFLNVVLQALASCVCFQ 97


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -2

Query: 159 RDGKASIPITLPWSFGRHSGSEKPLLVPGLQNLENNCFLNVVLQALASCFCFQ 1
           +D K     +LPWS  R   S +  L PGLQNL NNCFLNV+LQALASCFCF+
Sbjct: 52  KDNKMGNFGSLPWSSERGDFSSELCLAPGLQNLGNNCFLNVILQALASCFCFR 104


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = -2

Query: 132 TLPWSFGRHSGSEKPLLVPGLQNLENNCFLNVVLQALASCFCFQ 1
           +LPWS  R   S +  L PGLQNL NNCFLNV+LQALASCFCF+
Sbjct: 6   SLPWSSERGDFSSELCLAPGLQNLGNNCFLNVILQALASCFCFR 49


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