BLASTX nr result

ID: Glycyrrhiza24_contig00024506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024506
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603092.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   159   5e-37
ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   159   5e-37
gb|ADD51364.1| D3-type cyclin [Malus x domestica]                     133   2e-29
ref|XP_003523970.1| PREDICTED: cyclin-D3-1-like [Glycine max]         132   4e-29
ref|XP_003525909.1| PREDICTED: cyclin-D3-2-like [Glycine max]         132   7e-29

>ref|XP_003603092.1| Cyclin D3-1 [Medicago truncatula] gi|355492140|gb|AES73343.1|
           Cyclin D3-1 [Medicago truncatula]
          Length = 177

 Score =  159 bits (401), Expect = 5e-37
 Identities = 83/109 (76%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
 Frame = -2

Query: 621 LATATMIHVVNSVEPRLGAEYQSQLLGILGINKDKVDECSKLMLEL---YEQGKQCIKRK 451
           LATATM+HV NSVEP LG EYQ+QLLGILGINKDKVDEC KL+L+L   YE+G +C KRK
Sbjct: 66  LATATMVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRK 125

Query: 450 FGSIPGSPNCVMDVSFSCCDSSNDSWG-VAASVSSSPEPLSKKTRTQDQ 307
           FGSIP SP  VM++SFS CD+SNDSW  +AASVSSSPEPLSKK RTQDQ
Sbjct: 126 FGSIPSSPKGVMEMSFS-CDNSNDSWAIIAASVSSSPEPLSKKIRTQDQ 173


>ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|355492139|gb|AES73342.1|
           Cyclin D3-1 [Medicago truncatula]
           gi|388511523|gb|AFK43823.1| unknown [Medicago
           truncatula]
          Length = 348

 Score =  159 bits (401), Expect = 5e-37
 Identities = 83/109 (76%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
 Frame = -2

Query: 621 LATATMIHVVNSVEPRLGAEYQSQLLGILGINKDKVDECSKLMLEL---YEQGKQCIKRK 451
           LATATM+HV NSVEP LG EYQ+QLLGILGINKDKVDEC KL+L+L   YE+G +C KRK
Sbjct: 237 LATATMVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRK 296

Query: 450 FGSIPGSPNCVMDVSFSCCDSSNDSWG-VAASVSSSPEPLSKKTRTQDQ 307
           FGSIP SP  VM++SFS CD+SNDSW  +AASVSSSPEPLSKK RTQDQ
Sbjct: 297 FGSIPSSPKGVMEMSFS-CDNSNDSWAIIAASVSSSPEPLSKKIRTQDQ 344


>gb|ADD51364.1| D3-type cyclin [Malus x domestica]
          Length = 376

 Score =  133 bits (335), Expect = 2e-29
 Identities = 72/104 (69%), Positives = 82/104 (78%), Gaps = 5/104 (4%)
 Frame = -2

Query: 621 LATATMIHVVNSVEPRLGAEYQSQLLGILGINKDKVDECSKLMLELYE-----QGKQCIK 457
           +ATATM+HVV ++EP L  EYQ+QLLGILGINKDKVD+C KL+ EL        GKQ  K
Sbjct: 257 VATATMLHVVKNMEPCLLIEYQTQLLGILGINKDKVDDCCKLISELTSSGGNGSGKQSNK 316

Query: 456 RKFGSIPGSPNCVMDVSFSCCDSSNDSWGVAASVSSSPEPLSKK 325
           RKFGS+PGSP+ VMDVSFS  DSSNDSW   +SVSSSPEPLSKK
Sbjct: 317 RKFGSVPGSPSGVMDVSFS-SDSSNDSWATGSSVSSSPEPLSKK 359


>ref|XP_003523970.1| PREDICTED: cyclin-D3-1-like [Glycine max]
          Length = 349

 Score =  132 bits (333), Expect = 4e-29
 Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 4/107 (3%)
 Frame = -2

Query: 621 LATATMIHVVNSVEPRLGAEYQSQLLGILGINKDKVDECSKLMLELYE--QGKQCIKRKF 448
           LATATM+ V+ SVEP L AEY+SQL GIL I+K+KV+ C KLMLEL+   +GKQC+KRKF
Sbjct: 247 LATATMMQVLKSVEPSLEAEYKSQLFGILRIDKEKVNSCCKLMLELWSEFEGKQCMKRKF 306

Query: 447 GS--IPGSPNCVMDVSFSCCDSSNDSWGVAASVSSSPEPLSKKTRTQ 313
           G   IPGSPN VMDVSFSC  SSNDSW     VSSSPEPLSKK+R++
Sbjct: 307 GIGWIPGSPNGVMDVSFSCDSSSNDSW-----VSSSPEPLSKKSRSE 348


>ref|XP_003525909.1| PREDICTED: cyclin-D3-2-like [Glycine max]
          Length = 362

 Score =  132 bits (331), Expect = 7e-29
 Identities = 77/118 (65%), Positives = 90/118 (76%), Gaps = 13/118 (11%)
 Frame = -2

Query: 621 LATATMIHVVNSVEPRLGAEYQSQLLGILGINK---DKVDECSKLMLELY--------EQ 475
           LATATM+HVV SVEP L AEY+SQL GIL I+K   +KV+ C KL+LE++        EQ
Sbjct: 231 LATATMMHVVKSVEPGLEAEYKSQLFGILRIDKEKPEKVNSCCKLLLEVWSGYEEEEQEQ 290

Query: 474 GKQCIKRKF--GSIPGSPNCVMDVSFSCCDSSNDSWGVAASVSSSPEPLSKKTRTQDQ 307
           GKQC+KRKF  GSIPGSPN VMDVSFSC  SSNDS     SVSSSPEPLSKK+R+++Q
Sbjct: 291 GKQCMKRKFGIGSIPGSPNGVMDVSFSCDSSSNDS-----SVSSSPEPLSKKSRSEEQ 343


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