BLASTX nr result

ID: Glycyrrhiza24_contig00024495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024495
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518017.1| PREDICTED: uncharacterized protein LOC100809...   216   2e-54
ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262...   198   4e-49
emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]   198   4e-49
ref|XP_002524384.1| conserved hypothetical protein [Ricinus comm...   196   1e-48

>ref|XP_003518017.1| PREDICTED: uncharacterized protein LOC100809083 [Glycine max]
          Length = 290

 Score =  216 bits (549), Expect = 2e-54
 Identities = 113/149 (75%), Positives = 116/149 (77%), Gaps = 12/149 (8%)
 Frame = -2

Query: 411 SKFKSAFTVFTKXXXXXXXXXL------GTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLI 250
           SKFKSA TVFT                 GTRVVGTLFG+RRGHVHFAFQEDPKL PAFLI
Sbjct: 87  SKFKSALTVFTTRVPRLGLHHNKNSSSLGTRVVGTLFGHRRGHVHFAFQEDPKLGPAFLI 146

Query: 249 ELATPTSVLVREMASGLVRIALECENKNK------KKKSGVGLLEEPIWRTYCNGRKCGY 88
           ELATPTSVLVREMASGLVRIALECE K K         S V LLEEP+WRTYCNGRKCGY
Sbjct: 147 ELATPTSVLVREMASGLVRIALECEKKKKGDINYNASSSKVRLLEEPLWRTYCNGRKCGY 206

Query: 87  ANRRECGPEEWKILKAVEPISMGAGVLPM 1
           ANRRECGPE WKILKAVEPISMGAGVLP+
Sbjct: 207 ANRRECGPEVWKILKAVEPISMGAGVLPV 235


>ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  204 bits (518), Expect = 8e-51
 Identities = 103/136 (75%), Positives = 112/136 (82%)
 Frame = -2

Query: 411 SKFKSAFTVFTKXXXXXXXXXLGTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLIELATPT 232
           SK +SA TVF+K          GTRVVGTLFGYRRGHVHFAFQED K +PA LIELATPT
Sbjct: 80  SKLRSALTVFSKSRSAYHSGL-GTRVVGTLFGYRRGHVHFAFQEDAKQNPALLIELATPT 138

Query: 231 SVLVREMASGLVRIALECENKNKKKKSGVGLLEEPIWRTYCNGRKCGYANRRECGPEEWK 52
           SVLVREMASGLVRIALECE K  KK     LLEEP+WRTYCNG+KCGYA+RREC PE+WK
Sbjct: 139 SVLVREMASGLVRIALECEKKAGKKAG--KLLEEPLWRTYCNGKKCGYASRRECRPEDWK 196

Query: 51  ILKAVEPISMGAGVLP 4
           +LKAVEP+SMGAGVLP
Sbjct: 197 VLKAVEPVSMGAGVLP 212


>ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262757 [Vitis vinifera]
           gi|297737883|emb|CBI27084.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = -2

Query: 345 GTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLIELATPTSVLVREMASGLVRIALECENKN 166
           GTRV+GTLFGYRRGHVHFAFQEDPK  PAFL+ELAT TSVLVREMASGLVRIALEC+ K 
Sbjct: 100 GTRVIGTLFGYRRGHVHFAFQEDPKSHPAFLMELATSTSVLVREMASGLVRIALECDKKV 159

Query: 165 KKKKSGVGLLEEPIWRTYCNGRKCGYANRRECGPEEWKILKAVEPISMGAGVLP 4
           + KK G  LLEEP+WRTYCNG+KCGYA +RECG EEWK+LKAVEPISMGAGVLP
Sbjct: 160 EMKK-GTRLLEEPLWRTYCNGKKCGYAMKRECGAEEWKVLKAVEPISMGAGVLP 212


>emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]
          Length = 248

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = -2

Query: 345 GTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLIELATPTSVLVREMASGLVRIALECENKN 166
           GTRV+GTLFGYRRGHVHFAFQEDPK  PAFL+ELAT TSVLVREMASGLVRIALEC+ K 
Sbjct: 86  GTRVIGTLFGYRRGHVHFAFQEDPKSHPAFLMELATSTSVLVREMASGLVRIALECDKKV 145

Query: 165 KKKKSGVGLLEEPIWRTYCNGRKCGYANRRECGPEEWKILKAVEPISMGAGVLP 4
           + KK G  LLEEP+WRTYCNG+KCGYA +RECG EEWK+LKAVEPISMGAGVLP
Sbjct: 146 EMKK-GTRLLEEPLWRTYCNGKKCGYAMKRECGAEEWKVLKAVEPISMGAGVLP 198


>ref|XP_002524384.1| conserved hypothetical protein [Ricinus communis]
           gi|223536345|gb|EEF37995.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  196 bits (499), Expect = 1e-48
 Identities = 100/136 (73%), Positives = 109/136 (80%)
 Frame = -2

Query: 411 SKFKSAFTVFTKXXXXXXXXXLGTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLIELATPT 232
           SK +SA TVF             T++VGT+FGYRRGHVH AFQ D KL+P FLIELATPT
Sbjct: 74  SKLRSALTVFGMSRSAYHSGL-ATKLVGTIFGYRRGHVHLAFQVDVKLNPPFLIELATPT 132

Query: 231 SVLVREMASGLVRIALECENKNKKKKSGVGLLEEPIWRTYCNGRKCGYANRRECGPEEWK 52
           SVLVREMASGLVRIALECE K +KK     LL+EPIWRTYCNG+KCGYA RRECGPEEWK
Sbjct: 133 SVLVREMASGLVRIALECEKKPQKKAG--KLLDEPIWRTYCNGKKCGYAMRRECGPEEWK 190

Query: 51  ILKAVEPISMGAGVLP 4
           +LKAVEPISMGAGVLP
Sbjct: 191 VLKAVEPISMGAGVLP 206


Top