BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024489
         (1812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611237.1| CPD photolyase [Medicago truncatula] gi|3555...   897   0.0  
ref|NP_001238710.1| CPD photolyase [Glycine max] gi|169159213|db...   835   0.0  
ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   778   0.0  
ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   771   0.0  
ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis] ...   765   0.0  

>ref|XP_003611237.1| CPD photolyase [Medicago truncatula] gi|355512572|gb|AES94195.1| CPD
            photolyase [Medicago truncatula]
          Length = 517

 Score =  897 bits (2319), Expect = 0.0
 Identities = 435/517 (84%), Positives = 461/517 (89%), Gaps = 22/517 (4%)
 Frame = +1

Query: 61   MASAPSPMW----VNPGRIRTLKQGSGESGPVVYWMFRDQRLRDNWALIHAVHHANKANV 228
            MA+ PSP      VN GRIRTLK+GSG++GPVVYWMFRDQRL+DNWALIHAVH ANKA V
Sbjct: 1    MATTPSPPSMLPSVNSGRIRTLKEGSGKTGPVVYWMFRDQRLKDNWALIHAVHQANKAKV 60

Query: 229  PVAVVFNLFDHFLGAKSRHLGFMXXXXXXXXXXXXHTLQIPFFLVRGEAEETVSKFVREC 408
            PVAVVFNLFDHFLGAK+RHLGFM            H+L IPFFLVRGEAEETVSKFVREC
Sbjct: 61   PVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHSLHIPFFLVRGEAEETVSKFVREC 120

Query: 409  GASLLVTDMSPLREVRKCKEEICERVSELVTVHEVDAHNVVPLWVASDKLEYSARTIRGK 588
            GASLLVTDMSPLREV+KCK EICERVS+LVTVHEVDAHNVVPLWVAS+KLEYSARTIRGK
Sbjct: 121  GASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSARTIRGK 180

Query: 589  INKKLPEYLVDFPDIEPPTRKWVVPEDHSIDWDDHIAQVLRSGAEVPEVDWCEPGENAAM 768
            INKKL +YLVDFPD+EPP  KWV+ EDH IDWDD IAQVLRSG+EVPEVDWCEPGE AAM
Sbjct: 181  INKKLSDYLVDFPDVEPPNTKWVITEDHVIDWDDIIAQVLRSGSEVPEVDWCEPGEIAAM 240

Query: 769  EVLMGSKNGFLTKRLKNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSHP 948
            EVLMGSKNGFLTKRL+NYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLR S+P
Sbjct: 241  EVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRASYP 300

Query: 949  Q------------------AVDTFLEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLL 1074
            Q                  AVDTFLEELIVRRELADNFC+YQPHYDS+QGAWEWARKTLL
Sbjct: 301  QVCFTMLFMLLHFVFPKKVAVDTFLEELIVRRELADNFCYYQPHYDSIQGAWEWARKTLL 360

Query: 1075 DHASDKRQHTYTREQLEKAQTADRLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEE 1254
            DHASDKRQH YTREQLEKA+TAD LWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEE
Sbjct: 361  DHASDKRQHVYTREQLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEE 420

Query: 1255 ALEISIYLNDKYEMDGRDPNGYVGCMWSICGVHDQGWRERPVFGKIRYMNYEGCKRKFDV 1434
            ALEI IYLNDKYEMDGRDP+GY GCMWSICGVHDQGWRERP+FGKIRYMNYEGCKRKFDV
Sbjct: 421  ALEICIYLNDKYEMDGRDPSGYNGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDV 480

Query: 1435 DRYIAYVNKLVGELRQKRKSENLLSQKEKVLRCCDPD 1545
            DRYIAYVNK+VGELR KRK+ENLLS+KEKV RCC+P+
Sbjct: 481  DRYIAYVNKIVGELR-KRKAENLLSEKEKVRRCCNPE 516


>ref|NP_001238710.1| CPD photolyase [Glycine max] gi|169159213|dbj|BAG12106.1| CPD
            photolyase [Glycine max]
          Length = 500

 Score =  835 bits (2156), Expect = 0.0
 Identities = 406/500 (81%), Positives = 435/500 (87%), Gaps = 5/500 (1%)
 Frame = +1

Query: 61   MASAPSPMWVNPGRIRTLKQGS-GESG--PVVYWMFRDQRLRDNWALIHAVHHANKANVP 231
            MAS  SPM V  GR+RTLK+GS GESG  PVVYWMFRDQR+ DNWALIHAV  ANKANVP
Sbjct: 1    MASTASPMTVQAGRVRTLKEGSRGESGLGPVVYWMFRDQRVTDNWALIHAVAEANKANVP 60

Query: 232  VAVVFNLFDHFLGAKSRHLGFMXXXXXXXXXXXXHTLQIPFFLVRGEAEETVSKFVRECG 411
            VAVVFNLF  FLGAKSRHLGFM            H    P FL +GEA+ETV KF+RECG
Sbjct: 61   VAVVFNLFHTFLGAKSRHLGFMLRGLRQLCHRMQHYSSNPLFLFQGEADETVPKFLRECG 120

Query: 412  ASLLVTDMSPLREVRKCKEEICERVSELVTVHEVDAHNVVPLWVASDKLEYSARTIRGKI 591
            ASLLVTD SPLREVR+CKEEIC+RVS+ V VHEVDAHNVVPLWVASDKLEYSARTIR KI
Sbjct: 121  ASLLVTDFSPLREVRRCKEEICKRVSDSVAVHEVDAHNVVPLWVASDKLEYSARTIRAKI 180

Query: 592  NKKLPEYLVDFPDIE--PPTRKWVVPEDHSIDWDDHIAQVLRSGAEVPEVDWCEPGENAA 765
             K+L +YLVDFPDIE  PP  KWV  E+HSIDWDD IA VLR GAEVPEVDWCEPGE AA
Sbjct: 181  TKRLSDYLVDFPDIEVEPPAGKWVATENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIAA 240

Query: 766  MEVLMGSKNGFLTKRLKNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSH 945
             EVLMGSKNGFLTKRLK YS DRNNPC P ALSGLSPYLHFGQISAQRCALEARK R SH
Sbjct: 241  SEVLMGSKNGFLTKRLKGYSLDRNNPCHPNALSGLSPYLHFGQISAQRCALEARKRRNSH 300

Query: 946  PQAVDTFLEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLLDHASDKRQHTYTREQLE 1125
            PQA+D FLEELIVRRELADN+CFYQPHYDSL+GAW WA+ TL +HA+DKR+H YT+EQLE
Sbjct: 301  PQAIDAFLEELIVRRELADNYCFYQPHYDSLKGAWAWAQNTLTEHATDKREHIYTKEQLE 360

Query: 1126 KAQTADRLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEMDGR 1305
            KAQTAD LWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEIS+YLNDKYE+DGR
Sbjct: 361  KAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDGR 420

Query: 1306 DPNGYVGCMWSICGVHDQGWRERPVFGKIRYMNYEGCKRKFDVDRYIAYVNKLVGELRQK 1485
            DPNGYVGCMWSICGVHDQGW+ERP+FGKIRYMNY GCKRKFDVD+YIAYVNKLV EL+ K
Sbjct: 421  DPNGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRELK-K 479

Query: 1486 RKSENLLSQKEKVLRCCDPD 1545
            RK+ENLLSQKEKV+R CDP+
Sbjct: 480  RKAENLLSQKEKVVRSCDPE 499


>ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
            gi|449517475|ref|XP_004165771.1| PREDICTED:
            deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
            gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis
            sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase
            [Cucumis sativus]
          Length = 489

 Score =  778 bits (2009), Expect = 0.0
 Identities = 368/482 (76%), Positives = 409/482 (84%)
 Frame = +1

Query: 88   VNPGRIRTLKQGSGESGPVVYWMFRDQRLRDNWALIHAVHHANKANVPVAVVFNLFDHFL 267
            V P R R LK G+G  GPVVYWMFRDQR++DNWALIHAV  AN+ANVPVAV FNLFD FL
Sbjct: 9    VQPCRFRVLKDGTGSLGPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVAFNLFDRFL 68

Query: 268  GAKSRHLGFMXXXXXXXXXXXXHTLQIPFFLVRGEAEETVSKFVRECGASLLVTDMSPLR 447
            GAKSR LGFM             TLQIPFFL +GEAE+T+  F+RECGASLLVTD SPLR
Sbjct: 69   GAKSRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEAEQTIPNFIRECGASLLVTDFSPLR 128

Query: 448  EVRKCKEEICERVSELVTVHEVDAHNVVPLWVASDKLEYSARTIRGKINKKLPEYLVDFP 627
            EVRKCKEEIC+RV E V VHEVDAHNVVP WVAS+KLEYSA+T+RGKINKKLP+YL+D+P
Sbjct: 129  EVRKCKEEICKRVEESVKVHEVDAHNVVPTWVASEKLEYSAKTLRGKINKKLPDYLIDYP 188

Query: 628  DIEPPTRKWVVPEDHSIDWDDHIAQVLRSGAEVPEVDWCEPGENAAMEVLMGSKNGFLTK 807
             +  PTRKW    D  IDWD  I   LR GA+VPE++WC+PGE AAMEVLMGSK+GFLTK
Sbjct: 189  SMVIPTRKWP-SADKFIDWDRLIDDNLRKGADVPELEWCKPGEKAAMEVLMGSKDGFLTK 247

Query: 808  RLKNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSHPQAVDTFLEELIVR 987
            RLK Y+ DRNNP KP  LSGLSPYLHFGQISAQRCALEAR +R  +PQAVD FLEELIVR
Sbjct: 248  RLKGYAIDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARSIRKLNPQAVDVFLEELIVR 307

Query: 988  RELADNFCFYQPHYDSLQGAWEWARKTLLDHASDKRQHTYTREQLEKAQTADRLWNASQL 1167
            RELADN+C+YQPHYDSL GAWEWARKTL+DHASDKR++ YTREQLEKAQTAD LWNA+QL
Sbjct: 308  RELADNYCYYQPHYDSLLGAWEWARKTLMDHASDKREYIYTREQLEKAQTADPLWNAAQL 367

Query: 1168 EMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEMDGRDPNGYVGCMWSICG 1347
            EM H+GKMHGFMRMYWAKKILEWTRGPEEALEI IYLNDKYE+DGRDPNGYVGCMWSICG
Sbjct: 368  EMAHHGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVGCMWSICG 427

Query: 1348 VHDQGWRERPVFGKIRYMNYEGCKRKFDVDRYIAYVNKLVGELRQKRKSENLLSQKEKVL 1527
            VHDQGW+ERPVFGKIRYMNY GCKRKFDVD YIAYV +LVGE+++++  E L  +K K +
Sbjct: 428  VHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLVGEIKKRKPEETLEDRKPKGI 487

Query: 1528 RC 1533
            RC
Sbjct: 488  RC 489


>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
          Length = 485

 Score =  771 bits (1990), Expect = 0.0
 Identities = 375/485 (77%), Positives = 413/485 (85%), Gaps = 4/485 (0%)
 Frame = +1

Query: 88   VNPGRIRTLKQGSGESG----PVVYWMFRDQRLRDNWALIHAVHHANKANVPVAVVFNLF 255
            V  GRIR LK+GS  SG    PVVYWMFRDQRLRDNWALIHAV  ANKANVPVA+ FNLF
Sbjct: 2    VQQGRIRVLKEGSTPSGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIAFNLF 61

Query: 256  DHFLGAKSRHLGFMXXXXXXXXXXXXHTLQIPFFLVRGEAEETVSKFVRECGASLLVTDM 435
            D FLGAK+R LGFM             TLQIPFFL +GEA ET+  F+RE GASLLVTD 
Sbjct: 62   DQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIETIPNFLREYGASLLVTDF 121

Query: 436  SPLREVRKCKEEICERVSELVTVHEVDAHNVVPLWVASDKLEYSARTIRGKINKKLPEYL 615
            SPLREV+K KEEIC+RV + V++HEVDAHN+VP WVAS+KLEYSARTIRGKINK LPEYL
Sbjct: 122  SPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKINKLLPEYL 181

Query: 616  VDFPDIEPPTRKWVVPEDHSIDWDDHIAQVLRSGAEVPEVDWCEPGENAAMEVLMGSKNG 795
            +DFP ++PP+ KW    + SIDWDD I +VLR GAEVPE+ WCE GENAA+E+LMGSKNG
Sbjct: 182  IDFPTLQPPSIKWA-GTNQSIDWDDLITEVLREGAEVPEIKWCESGENAAVEILMGSKNG 240

Query: 796  FLTKRLKNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSHPQAVDTFLEE 975
            FLTKRLKNYSTDRNNP KP ALSGLSPYLHFGQISAQRCALEA+K R + PQAVD FLEE
Sbjct: 241  FLTKRLKNYSTDRNNPLKPGALSGLSPYLHFGQISAQRCALEAKKNRKNCPQAVDVFLEE 300

Query: 976  LIVRRELADNFCFYQPHYDSLQGAWEWARKTLLDHASDKRQHTYTREQLEKAQTADRLWN 1155
            LIVRRELADNFCFYQP Y+SLQGAWEWARKTL+DHASDKR+H YT+EQLE AQTAD LWN
Sbjct: 301  LIVRRELADNFCFYQPRYNSLQGAWEWARKTLMDHASDKREHIYTKEQLENAQTADPLWN 360

Query: 1156 ASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEMDGRDPNGYVGCMW 1335
            ASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEAL ISIYLNDKYE+DGRDPNGYVGCMW
Sbjct: 361  ASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRDPNGYVGCMW 420

Query: 1336 SICGVHDQGWRERPVFGKIRYMNYEGCKRKFDVDRYIAYVNKLVGELRQKRKSENLLSQK 1515
            SICGVHDQGW+ER +FGKIRYMNY GCKRKFDVD YIA+V +LV E + KRK+E+ L ++
Sbjct: 421  SICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAHVKRLVTETK-KRKAESSLGKE 479

Query: 1516 EKVLR 1530
             K LR
Sbjct: 480  AKELR 484


>ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis]
            gi|223549520|gb|EEF51008.1| DNA photolyase, putative
            [Ricinus communis]
          Length = 489

 Score =  765 bits (1976), Expect = 0.0
 Identities = 359/479 (74%), Positives = 407/479 (84%), Gaps = 1/479 (0%)
 Frame = +1

Query: 88   VNPGRIRTLKQG-SGESGPVVYWMFRDQRLRDNWALIHAVHHANKANVPVAVVFNLFDHF 264
            + PGR+R LK+G   ++GPV+YWMFRDQRLRDNWALIHAV  ANKANVPVAV FNLFD F
Sbjct: 8    IQPGRVRVLKEGLEKQTGPVIYWMFRDQRLRDNWALIHAVDQANKANVPVAVAFNLFDQF 67

Query: 265  LGAKSRHLGFMXXXXXXXXXXXXHTLQIPFFLVRGEAEETVSKFVRECGASLLVTDMSPL 444
            LGAK+R LGFM              LQIPFFL +G AE+T+ +F+ ECGASLLVTD SPL
Sbjct: 68   LGAKARQLGFMLKGLRLLQGKIEERLQIPFFLFQGAAEDTIPQFLGECGASLLVTDFSPL 127

Query: 445  REVRKCKEEICERVSELVTVHEVDAHNVVPLWVASDKLEYSARTIRGKINKKLPEYLVDF 624
            RE+RK K+EIC R+S+ VT+HEVDAHN+VP+WVAS+KLEYSARTIR KINK+LP+YL+DF
Sbjct: 128  REIRKSKDEICMRISDTVTIHEVDAHNIVPIWVASEKLEYSARTIRSKINKRLPDYLIDF 187

Query: 625  PDIEPPTRKWVVPEDHSIDWDDHIAQVLRSGAEVPEVDWCEPGENAAMEVLMGSKNGFLT 804
            P + PP   W    + SIDWD  I +VLR GAEVPE++WC PGE+AAMEVLMG+KNGFLT
Sbjct: 188  PALRPPNTMWSAAANKSIDWDTLIDEVLRKGAEVPEIEWCMPGEDAAMEVLMGTKNGFLT 247

Query: 805  KRLKNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSHPQAVDTFLEELIV 984
            KRLKNYSTDRNNP KP  LSGLSPYLHFGQISAQRCALEARK +   PQ+VD+FLEELIV
Sbjct: 248  KRLKNYSTDRNNPLKPQGLSGLSPYLHFGQISAQRCALEARKAQKLCPQSVDSFLEELIV 307

Query: 985  RRELADNFCFYQPHYDSLQGAWEWARKTLLDHASDKRQHTYTREQLEKAQTADRLWNASQ 1164
            RRELADNFCFYQPHYDSLQGAWEWAR TLLDHASDKR+H Y++EQLE+AQTAD LWNASQ
Sbjct: 308  RRELADNFCFYQPHYDSLQGAWEWARNTLLDHASDKREHIYSKEQLERAQTADLLWNASQ 367

Query: 1165 LEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEMDGRDPNGYVGCMWSIC 1344
            LEMV+YGKMHGFMRMYWAKKILEWTRGPEEAL IS YLNDKYE+DGRDP+GYVGCMWSIC
Sbjct: 368  LEMVYYGKMHGFMRMYWAKKILEWTRGPEEALAISTYLNDKYEIDGRDPSGYVGCMWSIC 427

Query: 1345 GVHDQGWRERPVFGKIRYMNYEGCKRKFDVDRYIAYVNKLVGELRQKRKSENLLSQKEK 1521
            GVHDQGW+ERP+FGKIRYMNY GCKRKF+VD YI YV + V E++ KRK+E    +K K
Sbjct: 428  GVHDQGWKERPIFGKIRYMNYAGCKRKFNVDSYITYVKRFVSEIK-KRKAETQFGRKAK 485