BLASTX nr result

ID: Glycyrrhiza24_contig00024481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024481
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626486.1| Translational activator GCN1 [Medicago trunc...   160   8e-38
ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Gly...   156   1e-36
ref|XP_003553769.1| PREDICTED: translational activator GCN1-like...   155   4e-36
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   125   5e-27
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              125   5e-27

>ref|XP_003626486.1| Translational activator GCN1 [Medicago truncatula]
           gi|355501501|gb|AES82704.1| Translational activator GCN1
           [Medicago truncatula]
          Length = 2751

 Score =  160 bits (406), Expect = 8e-38
 Identities = 87/118 (73%), Positives = 97/118 (82%), Gaps = 2/118 (1%)
 Frame = -1

Query: 351 NQRLWIFHREIPAFLNSCTS--DISAELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKAL 178
           NQRL IF RE+PAFLNS ++  ++S ELASLLTDIIFRTVAIYDDRRSRKAVDDVIVK+L
Sbjct: 21  NQRLRIFQREVPAFLNSSSTSDEMSTELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKSL 80

Query: 177 GGTVFMKTFAAALVQSMEKQLKSQSNVGCYRXXXXXXXXXXXSPFATISKKAFCRVAA 4
            GTVFMKTFAAALVQSMEKQLKSQS+VGCYR           S F+T+SK A CRVA+
Sbjct: 81  SGTVFMKTFAAALVQSMEKQLKSQSHVGCYRLLSWSCLLLSKSKFSTVSKNALCRVAS 138


>ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Glycine max]
          Length = 2616

 Score =  156 bits (395), Expect = 1e-36
 Identities = 86/117 (73%), Positives = 92/117 (78%)
 Frame = -1

Query: 351 NQRLWIFHREIPAFLNSCTSDISAELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKALGG 172
           N R+ IF REIPAFLNS TS++S ELASLLTDIIFRTVAIYDD RSRKAVDDVIVKALGG
Sbjct: 22  NHRVRIFRREIPAFLNSSTSEMSTELASLLTDIIFRTVAIYDDLRSRKAVDDVIVKALGG 81

Query: 171 TVFMKTFAAALVQSMEKQLKSQSNVGCYRXXXXXXXXXXXSPFATISKKAFCRVAAA 1
           TVFMKTFA ALVQ+MEKQ K QS+VG YR           S FA +SK A CRVAAA
Sbjct: 82  TVFMKTFAGALVQNMEKQSKFQSHVGGYRLLSWSCLLLSKSKFAAVSKNALCRVAAA 138


>ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max]
          Length = 2870

 Score =  155 bits (391), Expect = 4e-36
 Identities = 85/117 (72%), Positives = 92/117 (78%)
 Frame = -1

Query: 351 NQRLWIFHREIPAFLNSCTSDISAELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKALGG 172
           NQR+ IF REIPAFLNS TS++S ELASLL DIIFRTVAIYDD RSRKAVDDVIV+ALGG
Sbjct: 22  NQRVRIFRREIPAFLNSSTSEMSTELASLLIDIIFRTVAIYDDLRSRKAVDDVIVRALGG 81

Query: 171 TVFMKTFAAALVQSMEKQLKSQSNVGCYRXXXXXXXXXXXSPFATISKKAFCRVAAA 1
           TVFMKTFA ALVQ+MEKQ K QS+VG YR           S FA +SK A CRVAAA
Sbjct: 82  TVFMKTFAGALVQNMEKQSKFQSHVGGYRLLSWSCLLLSKSQFAAVSKNALCRVAAA 138


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = -1

Query: 348 QRLWIFHREIPAFLNSCTSDISAELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKALGGT 169
           +R+ IF  EIP  L +  S++SAELASLL DIIF T+ IYDD  SRKAVDDVI KALG  
Sbjct: 22  KRVRIFRDEIPPILTN--SEMSAELASLLVDIIFNTLYIYDDHGSRKAVDDVISKALGEV 79

Query: 168 VFMKTFAAALVQSMEKQLKSQSNVGCYRXXXXXXXXXXXSPFATISKKAFCRVA 7
           +FMK+FAA LVQ MEKQ K QSN+GCYR           S FA++SK AFCRVA
Sbjct: 80  IFMKSFAATLVQFMEKQSKFQSNIGCYRLLKWSCLLLSKSRFASVSKNAFCRVA 133


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = -1

Query: 348 QRLWIFHREIPAFLNSCTSDISAELASLLTDIIFRTVAIYDDRRSRKAVDDVIVKALGGT 169
           +R+ IF  EIP  L +  S++SAELASLL DIIF T+ IYDD  SRKAVDDVI KALG  
Sbjct: 22  KRVRIFRDEIPPILTN--SEMSAELASLLVDIIFNTLYIYDDHGSRKAVDDVISKALGEV 79

Query: 168 VFMKTFAAALVQSMEKQLKSQSNVGCYRXXXXXXXXXXXSPFATISKKAFCRVA 7
           +FMK+FAA LVQ MEKQ K QSN+GCYR           S FA++SK AFCRVA
Sbjct: 80  IFMKSFAATLVQFMEKQSKFQSNIGCYRLLKWSCLLLSKSRFASVSKNAFCRVA 133


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