BLASTX nr result

ID: Glycyrrhiza24_contig00024475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024475
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like...    85   7e-15
ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like...    84   2e-14
ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like...    80   2e-13
ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like...    65   6e-09
ref|XP_003613273.1| RING finger protein [Medicago truncatula] gi...    61   8e-08

>ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/89 (56%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
 Frame = +3

Query: 3   ALSNNRGDGG-----SMRQLRGRFAQFENSSIDG--GKINNIARKGESYSISKIWLWSRK 161
           AL  NRGDGG     SMRQL+GR   + NSS D   GK  NIARKGES+S+SKIW WS+K
Sbjct: 296 ALCPNRGDGGGVNGDSMRQLKGRLVNYGNSSTDDVEGKKINIARKGESFSVSKIWQWSKK 355

Query: 162 EKVXXXXXXXPHLGSNSDVNATFPWMNRA 248
           +KV        HLG  S+V A  PWM+RA
Sbjct: 356 DKVSISQEN--HLG-GSNVTAALPWMHRA 381


>ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/89 (55%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
 Frame = +3

Query: 3   ALSNNRGDGG-----SMRQLRGRFAQFENSSIDG--GKINNIARKGESYSISKIWLWSRK 161
           AL  NRGDGG     SMRQL+GR   + NSS D   GK  NI RKGES+S+SKIW WS+K
Sbjct: 296 ALCPNRGDGGGVSDSSMRQLKGRLTNYGNSSTDDVEGKKINITRKGESFSVSKIWQWSKK 355

Query: 162 EKVXXXXXXXPHLGSNSDVNATFPWMNRA 248
           +KV        HLG  S+V A  PW+NRA
Sbjct: 356 DKVSISQEN--HLG-GSNVTAALPWVNRA 381


>ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 380

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
 Frame = +3

Query: 30  GSMRQLRGRFAQFENSSIDG----GKINNIARKGESYSISKIWLWSRKEKVXXXXXXXPH 197
           GSMRQL+GR A   +S IDG    GK  NIARKGES+S+SKIW WSRK+K+        H
Sbjct: 302 GSMRQLKGRTATNGSSFIDGDAVEGKKINIARKGESFSVSKIWQWSRKDKL--TGSSDAH 359

Query: 198 LGSNSDVNATFPWMNRAHQGT 260
             ++S V +T PWMN+A  GT
Sbjct: 360 FLNSSTVTSTLPWMNKARGGT 380


>ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 376

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = +3

Query: 30  GSMRQL-RGRFAQFENSSIDG----GKINNIARKGESYSISKIWLWSRKEKVXXXXXXXP 194
           GSMRQL +GR A   +S +DG    GK  NIARKGES+S+SKIW  SRK+K+        
Sbjct: 299 GSMRQLLKGRAATNGSSFLDGDAVEGKKINIARKGESFSVSKIWQCSRKDKLTGSSDAHF 358

Query: 195 HLGSNSDVNATFPWMNR 245
           H   NS V +T PWMN+
Sbjct: 359 H---NSTVTSTLPWMNK 372


>ref|XP_003613273.1| RING finger protein [Medicago truncatula]
           gi|355514608|gb|AES96231.1| RING finger protein
           [Medicago truncatula]
          Length = 368

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
 Frame = +3

Query: 3   ALSNNRGDGGSMRQLRG----RFAQFENSSIDGGKINNIARKGESYSISKIWLWSRKE-K 167
           AL  ++GDG SMRQL+G    +   F N     GK  NIARKGES+S+SKIW WS+K+ K
Sbjct: 283 ALKASKGDG-SMRQLKGIREIQDGSFSNDGDVEGKKINIARKGESFSVSKIWQWSKKDSK 341

Query: 168 VXXXXXXXPHLGSNSDVNATFPWMNRA 248
           +        H   N   N +  WMN+A
Sbjct: 342 IPSSSDTHFH---NCVANESLQWMNKA 365


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