BLASTX nr result

ID: Glycyrrhiza24_contig00024456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024456
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510342.1| conserved hypothetical protein [Ricinus comm...   155   6e-36
ref|XP_003549424.1| PREDICTED: uncharacterized protein LOC100808...   142   3e-32
ref|XP_002281805.1| PREDICTED: uncharacterized protein LOC100262...   137   1e-30
emb|CAN61497.1| hypothetical protein VITISV_032988 [Vitis vinifera]   137   1e-30
ref|XP_002326896.1| predicted protein [Populus trichocarpa] gi|2...   118   7e-25

>ref|XP_002510342.1| conserved hypothetical protein [Ricinus communis]
           gi|223551043|gb|EEF52529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score =  155 bits (391), Expect = 6e-36
 Identities = 88/177 (49%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
 Frame = -1

Query: 589 SKRLFDGSKTTVSSTALEHAVVVSSPPLQQPIVPPNASKTNFHREYLTSPDSSDRGXXXX 410
           S+RLFDG +TT  + +LE+ ++     L+  I PPN +KTNFHREYLTSP +S +G    
Sbjct: 8   SERLFDGYRTTSHAVSLEYPLIY----LKSTIPPPNPAKTNFHREYLTSPGASGKGFFQ- 62

Query: 409 XXXXRKAVYHSGTARLPEFLSLPVGEKLREKLRGINNTAAAXXXXXXXXXXXGTPPAN-- 236
                + ++     +LPEFLS PVGEKLRE L+GIN T               T   N  
Sbjct: 63  -----RFLHRRAINQLPEFLSAPVGEKLREGLKGINITKDRLRLDEVAPPTF-TGDVNLF 116

Query: 235 GISVEDARKILKASQMEKVKAKLRDILESSISYSEFLQICVESCQNHDRGVEFAKMM 65
           GISV+DARK+L+ SQ+EK+KA+LR+I +SS+ YSEF+QICVE C N D+G+EFAKM+
Sbjct: 117 GISVQDARKVLRISQVEKLKARLREIPKSSVLYSEFVQICVEECGNEDQGIEFAKML 173


>ref|XP_003549424.1| PREDICTED: uncharacterized protein LOC100808882 [Glycine max]
          Length = 356

 Score =  142 bits (359), Expect = 3e-32
 Identities = 84/180 (46%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
 Frame = -1

Query: 595 LFSKRLFDGSKTTVSSTALEHAVVVSSPPLQQPIVPPNASKTNFHREYLTSPDSSDRGXX 416
           L SK  FDG K      +     VVSSP +QQ ++ P +         +    S+D G  
Sbjct: 6   LLSKHFFDGVKMRPFERS-----VVSSPTMQQQVIAPPS---------MLGVSSADGGFL 51

Query: 415 XXXXXXRKAVYHSGTARLPEFLSLPVGEKLREKLRGINNTAAAXXXXXXXXXXXGTPPA- 239
                 R+AVYHS  AR P+FLSLPVGEKLREKL+ INN A                 A 
Sbjct: 52  RRFFLLRQAVYHSSPARFPDFLSLPVGEKLREKLKSINNIAGIGDCCVALAPAPMASDAV 111

Query: 238 --NGISVEDARKILKASQMEKVKAKLRDILESSISYSEFLQICVESCQNHDRGVEFAKMM 65
             +G+SV  ARKIL+  QMEKVKAKLR++ ESS+ YSEFL+ICVE+C+NH++G EFAK++
Sbjct: 112 FGSGMSVSHARKILRVPQMEKVKAKLRNVSESSVPYSEFLRICVETCENHEQGAEFAKIL 171


>ref|XP_002281805.1| PREDICTED: uncharacterized protein LOC100262482 [Vitis vinifera]
           gi|302142441|emb|CBI19644.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  137 bits (346), Expect = 1e-30
 Identities = 87/182 (47%), Positives = 111/182 (60%), Gaps = 7/182 (3%)
 Frame = -1

Query: 589 SKRLFDGSKTTVSSTALEHAVVVSSPPLQQPIVPPNASKTNFHREYLTSPDSSDRGXXXX 410
           +KRL + ++T   +  LEH+ +  S P  Q +VP NA KTNFH ++L   DSSD G    
Sbjct: 8   AKRLLNITRTPSPAGTLEHSPI--SSPSFQNLVPSNAVKTNFHDDFL---DSSDSGFFRR 62

Query: 409 XXXXRKAVYHSGTARLPEFLSLPVGEKLREKLRGINNTAAAXXXXXXXXXXXGTPPA--- 239
               R     +  AR PE LS+PVG+KLREKLRG+N T               +PPA   
Sbjct: 63  FLQRRAL---NQLARFPELLSVPVGDKLREKLRGLNGTGERLRLDGL------SPPAPAM 113

Query: 238 ----NGISVEDARKILKASQMEKVKAKLRDILESSISYSEFLQICVESCQNHDRGVEFAK 71
               +GISVEDARK+LK SQ+EK+K  LR I ++SI YSEF+QICVE C N D+G EFAK
Sbjct: 114 RDSLDGISVEDARKLLKVSQVEKLKWTLRQIPKNSIPYSEFIQICVEVCSNKDQGAEFAK 173

Query: 70  MM 65
           M+
Sbjct: 174 ML 175


>emb|CAN61497.1| hypothetical protein VITISV_032988 [Vitis vinifera]
          Length = 356

 Score =  137 bits (346), Expect = 1e-30
 Identities = 87/182 (47%), Positives = 111/182 (60%), Gaps = 7/182 (3%)
 Frame = -1

Query: 589 SKRLFDGSKTTVSSTALEHAVVVSSPPLQQPIVPPNASKTNFHREYLTSPDSSDRGXXXX 410
           +KRL + ++T   +  LEH+ +  S P  Q +VP NA KTNFH ++L   DSSD G    
Sbjct: 8   AKRLLNITRTPSPAGTLEHSPI--SSPSFQNLVPSNAVKTNFHDDFL---DSSDSGFFRR 62

Query: 409 XXXXRKAVYHSGTARLPEFLSLPVGEKLREKLRGINNTAAAXXXXXXXXXXXGTPPA--- 239
               R     +  AR PE LS+PVG+KLREKLRG+N T               +PPA   
Sbjct: 63  FLQRRAL---NQLARFPELLSVPVGDKLREKLRGLNGTGERLRLDGL------SPPAPAM 113

Query: 238 ----NGISVEDARKILKASQMEKVKAKLRDILESSISYSEFLQICVESCQNHDRGVEFAK 71
               +GISVEDARK+LK SQ+EK+K  LR I ++SI YSEF+QICVE C N D+G EFAK
Sbjct: 114 RDSLDGISVEDARKLLKVSQVEKLKWTLRQIPKNSIPYSEFIQICVEVCSNKDQGAEFAK 173

Query: 70  MM 65
           M+
Sbjct: 174 ML 175


>ref|XP_002326896.1| predicted protein [Populus trichocarpa] gi|222835211|gb|EEE73646.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  118 bits (296), Expect = 7e-25
 Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 5/182 (2%)
 Frame = -1

Query: 595 LFSK-RLFDGSKTTVSSTALEHAVVVSSPPLQQPIVPPN--ASKTNFHREYLTSPDSSDR 425
           LFSK  +  G +    +  L+H    SS P++    P N   SKTN H+E LT  DS D+
Sbjct: 6   LFSKGTITSGCRVPSPAATLDH----SSSPIKPLTTPQNNAPSKTNLHKEPLTG-DSVDK 60

Query: 424 GXXXXXXXXRKAVYHSGTARLPEFLSLPVGEKLREKLRGINNTAAAXXXXXXXXXXXGTP 245
           G         + ++     +LPEF+S+P+GEKLREKL+G N ++                
Sbjct: 61  GLFR------RFLHRRAVNQLPEFISIPIGEKLREKLKGFNISSDRLHLDGLTPPEQVAG 114

Query: 244 PAN--GISVEDARKILKASQMEKVKAKLRDILESSISYSEFLQICVESCQNHDRGVEFAK 71
            AN  GISVE+A+K+L+ S MEK+KA+LR+I + SI YSEF+++CV+ C N  +GVEFA+
Sbjct: 115 EANTFGISVENAKKVLRVSLMEKLKARLREIPKVSIMYSEFVKVCVDECGNEYQGVEFAR 174

Query: 70  MM 65
           ++
Sbjct: 175 LI 176


Top