BLASTX nr result

ID: Glycyrrhiza24_contig00024448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024448
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62009.1| hypothetical protein VITISV_021498 [Vitis vinifera]   108   4e-22
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   108   6e-22
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   107   8e-22
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]   102   4e-20
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   102   4e-20

>emb|CAN62009.1| hypothetical protein VITISV_021498 [Vitis vinifera]
          Length = 547

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/90 (55%), Positives = 66/90 (73%)
 Frame = -1

Query: 271 SYFFLAASSKYCSVLQHEAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDRSSAIE 92
           SY  ++      S+   EAEF+AA+SCACQA+W+RR+L   +  Q +  I+FCD SS I+
Sbjct: 367 SYVLVSRKQPVVSLSTIEAEFIAATSCACQAVWMRRILEKLSHTQGNCTIMFCDNSSTIK 426

Query: 91  LSKNSVFHGRSKHIYVRFHFLRELTRDGVV 2
           LSKN + HGRSKHI VRFHFLR+LT++GVV
Sbjct: 427 LSKNPMMHGRSKHIDVRFHFLRDLTKEGVV 456


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/73 (67%), Positives = 60/73 (82%)
 Frame = -1

Query: 220  EAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDRSSAIELSKNSVFHGRSKHIYVR 41
            EAE+VAA+ CACQ++W+RRVLN    +Q   + +FCD SS I+LSKN VFHGRSKHI VR
Sbjct: 1075 EAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVR 1134

Query: 40   FHFLRELTRDGVV 2
            FHFLR+LT+DGVV
Sbjct: 1135 FHFLRDLTKDGVV 1147


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = -1

Query: 220  EAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDRSSAIELSKNSVFHGRSKHIYVR 41
            EAEF+AA+SC CQAIW+RR+L   N AQ DS  ++CD SS I+LSKN V HGR KHI V 
Sbjct: 1226 EAEFIAATSCVCQAIWLRRILEGLNHAQHDSTTVYCDNSSTIKLSKNLVMHGRCKHIDVH 1285

Query: 40   FHFLRELTRDGVV 2
            FHFLRELT+DG V
Sbjct: 1286 FHFLRELTKDGTV 1298


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = -1

Query: 220 EAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDRSSAIELSKNSVFHGRSKHIYVR 41
           EAEF+AA+SCACQAIWIRR+L+  +  QS+   +FCD SS I+LSKN V  GRSKHI V 
Sbjct: 196 EAEFIAATSCACQAIWIRRILDKLSHTQSNCTTVFCDNSSTIKLSKNPVMDGRSKHIDVH 255

Query: 40  FHFLRELTRDGVV 2
           FHFL +LT++GVV
Sbjct: 256 FHFLHDLTKEGVV 268



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/92 (29%), Positives = 53/92 (57%)
 Frame = -1

Query: 286  FLRPWSYFFLAASSKYCSVLQHEAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDR 107
            F+  +   +L+      S    EA+++   SC    IW++++ +D++  Q D++ + CD 
Sbjct: 1632 FVSDYLVAWLSKKQNLVSFSIMEAKYIVVGSCYTHLIWMKKMFSDYDIEQ-DTMNVMCDN 1690

Query: 106  SSAIELSKNSVFHGRSKHIYVRFHFLRELTRD 11
             +AI +SKN  FH ++K+I ++ HF+R+   D
Sbjct: 1691 MTAINISKNLFFHSQTKYIEIQHHFIRDFIED 1722


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = -1

Query: 220  EAEFVAASSCACQAIWIRRVLNDFNPAQSDSIIIFCDRSSAIELSKNSVFHGRSKHIYVR 41
            EAEFVAA+SCACQ +W++RVL     +Q     + CD SS I+LSKN V HGRSKHI VR
Sbjct: 972  EAEFVAAASCACQGVWMKRVLEKLGHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVR 1031

Query: 40   FHFLRELTRDGVV 2
            FHFLR+LTR+GVV
Sbjct: 1032 FHFLRDLTREGVV 1044


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