BLASTX nr result

ID: Glycyrrhiza24_contig00024439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024439
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537307.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-...   432   e-119
ref|XP_003552938.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-...   429   e-118
emb|CBI15906.3| unnamed protein product [Vitis vinifera]              384   e-105
ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein ca...   384   e-105
emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]   384   e-105

>ref|XP_003537307.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
           catalytic subunit-like [Glycine max]
          Length = 938

 Score =  432 bits (1110), Expect = e-119
 Identities = 214/241 (88%), Positives = 225/241 (93%)
 Frame = -2

Query: 725 HFDDFTLASSWERFISEIEAVCRLWMSDGPNNLLEKGAVLLEYSGNLYKVTSEMKYAMKS 546
           HFDDFTLASSWERFIS+IEAV R+WMSDGP NLLEKGAVLLE +GNLYKV SEMKYAMKS
Sbjct: 28  HFDDFTLASSWERFISKIEAVLRVWMSDGPKNLLEKGAVLLEDAGNLYKVKSEMKYAMKS 87

Query: 545 YSMEYYFETNPSGKPADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVA 366
           Y ME+YF T+P GK ADWNFDLHDLQLCFGVKEFLVIAPQSASGV+LDAPE+SKLLSA+A
Sbjct: 88  YCMEFYFMTDPDGKLADWNFDLHDLQLCFGVKEFLVIAPQSASGVILDAPESSKLLSAIA 147

Query: 365 IALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKLMHLEGLYEL 186
           IALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVP+KLMHLEGLYEL
Sbjct: 148 IALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPVKLMHLEGLYEL 207

Query: 185 FVSKFAYSTLDLSVHNFKVRFAMKLTFRTLPYDEDYMKDFDAKITKSGENLTGETSNGMQ 6
           FVSKFAYSTLDLSVHNFKVR AMKLTFRTLPYD+D MK  DAKI+KSGENLTG   NG Q
Sbjct: 208 FVSKFAYSTLDLSVHNFKVRCAMKLTFRTLPYDDDNMK--DAKISKSGENLTGPMCNGTQ 265

Query: 5   W 3
           W
Sbjct: 266 W 266


>ref|XP_003552938.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
           catalytic subunit-like [Glycine max]
          Length = 969

 Score =  429 bits (1102), Expect = e-118
 Identities = 217/250 (86%), Positives = 228/250 (91%), Gaps = 9/250 (3%)
 Frame = -2

Query: 725 HFDDFTLASSWERFISEIEAVCRLWMSDGPNNLLEKGAVLLEYSGNLYKVTSEMKYAMKS 546
           HFDDFTLASSWERFISEIEAV R+WMSDGPNNLLEKGAVLLE +GNLYKV SEMKYAMKS
Sbjct: 47  HFDDFTLASSWERFISEIEAVLRVWMSDGPNNLLEKGAVLLEDAGNLYKVKSEMKYAMKS 106

Query: 545 YSMEYYFETNPSG---------KPADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPE 393
           Y ME+YF+T+P G         K ADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPE
Sbjct: 107 YCMEFYFKTDPDGIFFXGVGLGKLADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPE 166

Query: 392 ASKLLSAVAIALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKL 213
           +SKLLSA+AIALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVP+KL
Sbjct: 167 SSKLLSAIAIALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPVKL 226

Query: 212 MHLEGLYELFVSKFAYSTLDLSVHNFKVRFAMKLTFRTLPYDEDYMKDFDAKITKSGENL 33
           MHLEGLYELFVSKFAYSTLDLSVHNFKVR AMKLTFRTLPYD+D +K  DAKI+KSGENL
Sbjct: 227 MHLEGLYELFVSKFAYSTLDLSVHNFKVRCAMKLTFRTLPYDDDNIK--DAKISKSGENL 284

Query: 32  TGETSNGMQW 3
           TGE S G QW
Sbjct: 285 TGEMSIGTQW 294


>emb|CBI15906.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score =  384 bits (987), Expect = e-105
 Identities = 191/244 (78%), Positives = 211/244 (86%), Gaps = 4/244 (1%)
 Frame = -2

Query: 722 FDDFTLASSWERFISEIEAVCRLWMSDGPNNLLEKGAVLLEYSGNLYKVTSEMKYAMKSY 543
           FDDFTLASSWERFISEIEAVCRLW++DGP NLLEKGAV L +S +LYKV  E+KY MKSY
Sbjct: 21  FDDFTLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSY 80

Query: 542 SMEYYFETNPSGKPADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAI 363
            MEYYFET  +GK  DW F +HDLQL FGVKEFLVIAPQSASGVVLDAPEASKLLSA+AI
Sbjct: 81  FMEYYFETTSAGKVTDWKFSMHDLQLSFGVKEFLVIAPQSASGVVLDAPEASKLLSAIAI 140

Query: 362 ALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKLMHLEGLYELF 183
           ALSNCSSLWPAFVPVHDPSRKAYIGIQ+MGTVFTRRFEADRIGSQVP+KLMHLEGLYELF
Sbjct: 141 ALSNCSSLWPAFVPVHDPSRKAYIGIQNMGTVFTRRFEADRIGSQVPVKLMHLEGLYELF 200

Query: 182 VSKFAYSTLDLSVHNFKVRFAMKLTFRTLPYDED----YMKDFDAKITKSGENLTGETSN 15
           VSKFA++TLD+S H FKV F MKLT+RTLPYD+D     ++  DA IT+SG   +G+T N
Sbjct: 201 VSKFAFATLDVSTHLFKVHFTMKLTYRTLPYDDDDNDVDIQGADADITESGGTPSGDTRN 260

Query: 14  GMQW 3
             QW
Sbjct: 261 KAQW 264


>ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like
           [Vitis vinifera]
          Length = 891

 Score =  384 bits (987), Expect = e-105
 Identities = 191/244 (78%), Positives = 211/244 (86%), Gaps = 4/244 (1%)
 Frame = -2

Query: 722 FDDFTLASSWERFISEIEAVCRLWMSDGPNNLLEKGAVLLEYSGNLYKVTSEMKYAMKSY 543
           FDDFTLASSWERFISEIEAVCRLW++DGP NLLEKGAV L +S +LYKV  E+KY MKSY
Sbjct: 21  FDDFTLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSY 80

Query: 542 SMEYYFETNPSGKPADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAI 363
            MEYYFET  +GK  DW F +HDLQL FGVKEFLVIAPQSASGVVLDAPEASKLLSA+AI
Sbjct: 81  FMEYYFETTSAGKVTDWKFSMHDLQLSFGVKEFLVIAPQSASGVVLDAPEASKLLSAIAI 140

Query: 362 ALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKLMHLEGLYELF 183
           ALSNCSSLWPAFVPVHDPSRKAYIGIQ+MGTVFTRRFEADRIGSQVP+KLMHLEGLYELF
Sbjct: 141 ALSNCSSLWPAFVPVHDPSRKAYIGIQNMGTVFTRRFEADRIGSQVPVKLMHLEGLYELF 200

Query: 182 VSKFAYSTLDLSVHNFKVRFAMKLTFRTLPYDED----YMKDFDAKITKSGENLTGETSN 15
           VSKFA++TLD+S H FKV F MKLT+RTLPYD+D     ++  DA IT+SG   +G+T N
Sbjct: 201 VSKFAFATLDVSTHLFKVHFTMKLTYRTLPYDDDDNDVDIQGADADITESGGTPSGDTRN 260

Query: 14  GMQW 3
             QW
Sbjct: 261 KAQW 264


>emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]
          Length = 494

 Score =  384 bits (987), Expect = e-105
 Identities = 191/244 (78%), Positives = 211/244 (86%), Gaps = 4/244 (1%)
 Frame = -2

Query: 722 FDDFTLASSWERFISEIEAVCRLWMSDGPNNLLEKGAVLLEYSGNLYKVTSEMKYAMKSY 543
           FDDFTLASSWERFISEIEAVCRLW++DGP NLLEKGAV L +S +LYKV  E+KY MKSY
Sbjct: 21  FDDFTLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSY 80

Query: 542 SMEYYFETNPSGKPADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAI 363
            MEYYFET  +GK  DW F +HDLQL FGVKEFLVIAPQSASGVVLDAPEASKLLSA+AI
Sbjct: 81  FMEYYFETTSAGKVTDWKFSMHDLQLSFGVKEFLVIAPQSASGVVLDAPEASKLLSAIAI 140

Query: 362 ALSNCSSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKLMHLEGLYELF 183
           ALSNCSSLWPAFVPVHDPSRKAYIGIQ+MGTVFTRRFEADRIGSQVP+KLMHLEGLYELF
Sbjct: 141 ALSNCSSLWPAFVPVHDPSRKAYIGIQNMGTVFTRRFEADRIGSQVPVKLMHLEGLYELF 200

Query: 182 VSKFAYSTLDLSVHNFKVRFAMKLTFRTLPYDED----YMKDFDAKITKSGENLTGETSN 15
           VSKFA++TLD+S H FKV F MKLT+RTLPYD+D     ++  DA IT+SG   +G+T N
Sbjct: 201 VSKFAFATLDVSTHLFKVHFTMKLTYRTLPYDDDDNDVDIQGADADITESGGTPSGDTRN 260

Query: 14  GMQW 3
             QW
Sbjct: 261 KAQW 264


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