BLASTX nr result

ID: Glycyrrhiza24_contig00024438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024438
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago tru...   260   9e-68
ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...   248   3e-64
ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Gl...   239   2e-61
ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus tric...   207   5e-52
ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vi...   203   1e-50

>ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
           gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1406

 Score =  260 bits (664), Expect = 9e-68
 Identities = 124/150 (82%), Positives = 138/150 (92%)
 Frame = -2

Query: 450 EWEDALEKLRRIRPGHLQDVLKISYDGLDEQEKCIFLDMACFFVQMGMTRDEVIDVLRGC 271
           EWED ++KL+ IRPG+L DVLKISYDGLDEQEKCIFLD+ACFFVQMGM RD+VIDVLRGC
Sbjct: 408 EWEDVVKKLKTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFVQMGMKRDDVIDVLRGC 467

Query: 270 GFRGETAITVLVEKCLIKITLENTLSMHDQIRDMGRQIVLDENHVDPGMRSRLWERAEVM 91
           GFRGE A TVLVEKCLIK+  +NTL MHDQIRDMGRQIVLDENHVDPGMRSRLW+RAE+M
Sbjct: 468 GFRGEIATTVLVEKCLIKVREDNTLWMHDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIM 527

Query: 90  AVLKSQKGTRCIQGIVLDFKEQSRQRNMNY 1
           +VLKS+KGTRCIQGIVLDFKE+S Q + NY
Sbjct: 528 SVLKSKKGTRCIQGIVLDFKERSNQWSKNY 557


>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
           gi|355522600|gb|AET03054.1| Leucine-rich
           repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  248 bits (634), Expect = 3e-64
 Identities = 123/153 (80%), Positives = 134/153 (87%), Gaps = 10/153 (6%)
 Frame = -2

Query: 450 EWEDALEKLRRIRPGHLQDVLKISYDGLDEQEKCIFLDMACFFVQMGMTRDEVIDVLRGC 271
           EWED LEKLR IRPG+L DVLKISYDGL+EQEKCIFLD+ACFFVQMGM RD+VIDVLRGC
Sbjct: 214 EWEDVLEKLRTIRPGNLHDVLKISYDGLEEQEKCIFLDIACFFVQMGMKRDDVIDVLRGC 273

Query: 270 GFRGETAITVLVEKCLIKITLENTLSMHDQIRDMGRQIVLDENHVDPGMRSRLWERAEVM 91
           GFRGE A TVLVEKCLIK+  +NTL MHDQIRDMGRQIVLDENHVDPGMRSRLW+RAE+M
Sbjct: 274 GFRGEIATTVLVEKCLIKVREDNTLWMHDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIM 333

Query: 90  AVLKSQK----------GTRCIQGIVLDFKEQS 22
           +VLKS+K          GTRCIQGIVLDFKE+S
Sbjct: 334 SVLKSKKVKIQKHSKMHGTRCIQGIVLDFKERS 366


>ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/148 (80%), Positives = 131/148 (88%), Gaps = 1/148 (0%)
 Frame = -2

Query: 450 EWEDALEKLRRIRPGHLQDVLKISYDGLDEQEKCIFLDMACFFVQMGMTRDEVIDVLRGC 271
           EWEDA+EKLR+IRP HLQDVLKISYD LDE+EKCIFLDMAC FVQMGM RD+VIDVLRGC
Sbjct: 400 EWEDAVEKLRQIRPKHLQDVLKISYDALDEEEKCIFLDMACLFVQMGMKRDDVIDVLRGC 459

Query: 270 GFRGETAITVLVEKCLIKITLE-NTLSMHDQIRDMGRQIVLDENHVDPGMRSRLWERAEV 94
           GFRGE AITVLV+KCLIKIT E NTL MHDQIRDMGRQIV+DE+ VDPG RSRLW+RAE+
Sbjct: 460 GFRGEIAITVLVQKCLIKITDEDNTLWMHDQIRDMGRQIVVDESIVDPGKRSRLWDRAEI 519

Query: 93  MAVLKSQKGTRCIQGIVLDFKEQSRQRN 10
           M+VLK   GTRCIQGIVLDF+E    R+
Sbjct: 520 MSVLKGHMGTRCIQGIVLDFEEDRFYRS 547


>ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1360

 Score =  207 bits (528), Expect = 5e-52
 Identities = 95/146 (65%), Positives = 123/146 (84%)
 Frame = -2

Query: 450 EWEDALEKLRRIRPGHLQDVLKISYDGLDEQEKCIFLDMACFFVQMGMTRDEVIDVLRGC 271
           +WED L+KLR IRPG+LQDVL+IS+DGLD++EKC+FLD+AC F++M M R+E ID+L GC
Sbjct: 402 KWEDVLKKLREIRPGNLQDVLRISFDGLDDEEKCVFLDIACLFIKMRMKREEAIDILNGC 461

Query: 270 GFRGETAITVLVEKCLIKITLENTLSMHDQIRDMGRQIVLDENHVDPGMRSRLWERAEVM 91
           GFR ETAITVL  KCLIKI  +  L MHDQ+RDMGRQIV DEN +DPGMRSRLW+R ++M
Sbjct: 462 GFRAETAITVLTVKCLIKIGGDYELWMHDQLRDMGRQIVRDENLLDPGMRSRLWDRGDIM 521

Query: 90  AVLKSQKGTRCIQGIVLDFKEQSRQR 13
            +LK +KGTR +QG++LDF++++  R
Sbjct: 522 TMLKHKKGTRHVQGLILDFEKKNYVR 547


>ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  203 bits (517), Expect = 1e-50
 Identities = 94/139 (67%), Positives = 118/139 (84%)
 Frame = -2

Query: 450 EWEDALEKLRRIRPGHLQDVLKISYDGLDEQEKCIFLDMACFFVQMGMTRDEVIDVLRGC 271
           EWEDAL+KL++IRP  LQ VLKISYDGLDEQEKC+FLD+AC F++MGM +++ ID+L+GC
Sbjct: 407 EWEDALQKLKQIRPMDLQGVLKISYDGLDEQEKCVFLDIACLFIKMGMKKEDAIDILKGC 466

Query: 270 GFRGETAITVLVEKCLIKITLENTLSMHDQIRDMGRQIVLDENHVDPGMRSRLWERAEVM 91
           GFR E  I VLV+K L+KI  + TL MHDQ+RDMGRQIVL ENH D GMRSRLW+R+E++
Sbjct: 467 GFRAEIGIKVLVDKSLLKIAEDYTLWMHDQLRDMGRQIVLHENHEDLGMRSRLWDRSEIL 526

Query: 90  AVLKSQKGTRCIQGIVLDF 34
            VL++  G+RCIQG+VLDF
Sbjct: 527 RVLQNNLGSRCIQGMVLDF 545


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