BLASTX nr result

ID: Glycyrrhiza24_contig00024406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024406
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554287.1| PREDICTED: U-box domain-containing protein 3...   188   5e-46
ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3...   181   4e-44
ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3...   132   2e-29
ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3...   132   2e-29
ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus ...   122   3e-26

>ref|XP_003554287.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 775

 Score =  188 bits (477), Expect = 5e-46
 Identities = 94/133 (70%), Positives = 109/133 (81%)
 Frame = +1

Query: 1   QIPLDENLYKECEELDMQVNEAREFIEKWGPKMSKIHSVLRSGELLVKLQSTSLKICDII 180
           +IPLDENL++ECEELDMQVNEAREFIEK GPKMS+IHSVL+SGELL+KLQ++S KIC +I
Sbjct: 77  KIPLDENLHRECEELDMQVNEAREFIEKLGPKMSRIHSVLQSGELLIKLQNSSYKICHMI 136

Query: 181 ARSPKSPSSVSVLTNLQHHVQELQCLKKEPAMVYIEEALRNQRDNIEPCYEXXXXXXXXX 360
            +S K+P+SV VL   Q ++QELQCLKKEPAMVYIEEALRNQRDNIEPCY+         
Sbjct: 137 VKSLKAPASVLVLATFQQYMQELQCLKKEPAMVYIEEALRNQRDNIEPCYDSLKEIIGLL 196

Query: 361 XXXXXQELLKESI 399
                QELLKESI
Sbjct: 197 KLTSNQELLKESI 209


>ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 759

 Score =  181 bits (460), Expect = 4e-44
 Identities = 91/133 (68%), Positives = 108/133 (81%)
 Frame = +1

Query: 1   QIPLDENLYKECEELDMQVNEAREFIEKWGPKMSKIHSVLRSGELLVKLQSTSLKICDII 180
           +IP DENL++ECEELDM+VNEAREFIEKWGPKMS+IHSVL+SGELL+KLQ++S KIC +I
Sbjct: 58  KIPFDENLHRECEELDMRVNEAREFIEKWGPKMSRIHSVLQSGELLIKLQNSSYKICHMI 117

Query: 181 ARSPKSPSSVSVLTNLQHHVQELQCLKKEPAMVYIEEALRNQRDNIEPCYEXXXXXXXXX 360
            +S K P+SV V  NLQ ++QELQCLKKEPAM+YIE+ALRNQRDNIEPCY+         
Sbjct: 118 VKSLKGPASVLVSGNLQQYMQELQCLKKEPAMIYIEDALRNQRDNIEPCYD-SLKEIIRL 176

Query: 361 XXXXXQELLKESI 399
                QELL ESI
Sbjct: 177 LMISNQELLIESI 189


>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
           vinifera]
          Length = 757

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/133 (54%), Positives = 94/133 (70%)
 Frame = +1

Query: 1   QIPLDENLYKECEELDMQVNEAREFIEKWGPKMSKIHSVLRSGELLVKLQSTSLKICDII 180
           +IP DE L+KECEELDM VNEAREF+E W PKMSKI SVL+S +L++K+QS+SL+IC I+
Sbjct: 55  KIPSDEILFKECEELDMAVNEAREFVENWCPKMSKIFSVLQSEQLVMKIQSSSLEICFIL 114

Query: 181 ARSPKSPSSVSVLTNLQHHVQELQCLKKEPAMVYIEEALRNQRDNIEPCYEXXXXXXXXX 360
            R   S  SVS LT++QH +Q+LQ L+++    YIE+ALR+QRD I P  +         
Sbjct: 115 CRLLHSSPSVSNLTSIQHCMQKLQHLEQKRISEYIEQALRSQRDEIIPHTQQLAKIIESL 174

Query: 361 XXXXXQELLKESI 399
                QELLKES+
Sbjct: 175 SLTSKQELLKESV 187


>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 764

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/133 (54%), Positives = 94/133 (70%)
 Frame = +1

Query: 1   QIPLDENLYKECEELDMQVNEAREFIEKWGPKMSKIHSVLRSGELLVKLQSTSLKICDII 180
           +IP DE L+KECEELDM VNEAREF+E W PKMSKI SVL+S +L++K+QS+SL+IC I+
Sbjct: 55  KIPSDEILFKECEELDMAVNEAREFVENWCPKMSKIFSVLQSEQLVMKIQSSSLEICFIL 114

Query: 181 ARSPKSPSSVSVLTNLQHHVQELQCLKKEPAMVYIEEALRNQRDNIEPCYEXXXXXXXXX 360
            R   S  SVS LT++QH +Q+LQ L+++    YIE+ALR+QRD I P  +         
Sbjct: 115 CRLLHSSPSVSNLTSIQHCMQKLQHLEQKRISEYIEQALRSQRDEIIPHTQQLAKIIESL 174

Query: 361 XXXXXQELLKESI 399
                QELLKES+
Sbjct: 175 SLTSKQELLKESV 187


>ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223528306|gb|EEF30352.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 753

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/129 (48%), Positives = 88/129 (68%)
 Frame = +1

Query: 13  DENLYKECEELDMQVNEAREFIEKWGPKMSKIHSVLRSGELLVKLQSTSLKICDIIARSP 192
           D+ LYKECEELD+ VN AR+F+E W PKMSK+ SV +S  L +K++ +S+KIC +++R  
Sbjct: 59  DQILYKECEELDLAVNGARDFMENWCPKMSKLCSVQQSEALYMKIRISSVKICHLLSRLL 118

Query: 193 KSPSSVSVLTNLQHHVQELQCLKKEPAMVYIEEALRNQRDNIEPCYEXXXXXXXXXXXXX 372
           +S  S S LT++QH +QELQ LK+E    +IEEA+RN+RD + PC +             
Sbjct: 119 RSSPSTSSLTSIQHCMQELQSLKQEMMTEHIEEAVRNKRDEVVPCSDPLVKIIQSLSLTS 178

Query: 373 XQELLKESI 399
            QE+LKES+
Sbjct: 179 GQEILKESV 187


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