BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024400
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_171850.1| pentatricopeptide repeat-containing protein [Ar...    92   3e-17
ref|XP_002892165.1| pentatricopeptide repeat-containing protein ...    89   3e-16
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...    86   2e-15
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]    86   2e-15
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...    77   2e-12

>ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g03510 gi|9280666|gb|AAF86535.1|AC002560_28
           F21B7.13 [Arabidopsis thaliana]
           gi|332189459|gb|AEE27580.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 429

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/105 (48%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   LTKLMCSHINQSRHDEAXXXXXXXXXXXXXX-DAHVFSLALKSCTATNRPILGTSIHAHS 178
           LTK + S+ NQ  H++A               DAHVFSLALKSC A  RP+LG S+HAHS
Sbjct: 15  LTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHS 74

Query: 179 LKSSYLSNNPFIXXXXXXXXXXXXXXXXARHLFDETPRRNAVVWN 313
           +KS++LS NPF+                AR LFDE P+RNAVVWN
Sbjct: 75  VKSNFLS-NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWN 118


>ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338007|gb|EFH68424.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 429

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/105 (47%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   LTKLMCSHINQSRHDEAXXXXXXXXXXXXXX-DAHVFSLALKSCTATNRPILGTSIHAHS 178
           LTK + S+ NQ  H++A               DAHVFSLALKSC A   P+LG S+HAHS
Sbjct: 15  LTKQLSSYANQGFHEQALTLFRQMHSSFALPLDAHVFSLALKSCAAAFHPVLGGSVHAHS 74

Query: 179 LKSSYLSNNPFIXXXXXXXXXXXXXXXXARHLFDETPRRNAVVWN 313
           +KS++LS NPF+                AR LFDE P+RNAVVWN
Sbjct: 75  VKSNFLS-NPFVGCALLDMYGKCLSVTHARKLFDEIPQRNAVVWN 118


>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5   TKLMCSHINQSRHDEAXXXXXXXXXXXXXX-DAHVFSLALKSCTATNRPILGTSIHAHSL 181
           TKL+ SH+NQ RH +A               DA VF LALKSC A +RP LG +IHAH  
Sbjct: 15  TKLLASHVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVT 74

Query: 182 KSSYLSNNPFIXXXXXXXXXXXXXXXXARHLFDETPRRNAVVWN 313
           K S +S NPF+                ARHLFDE P RN VVWN
Sbjct: 75  KFSLVS-NPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWN 117


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5   TKLMCSHINQSRHDEAXXXXXXXXXXXXXX-DAHVFSLALKSCTATNRPILGTSIHAHSL 181
           TKL+ SH+NQ RH +A               DA VF LALKSC A +RP LG +IHAH  
Sbjct: 15  TKLLASHVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVT 74

Query: 182 KSSYLSNNPFIXXXXXXXXXXXXXXXXARHLFDETPRRNAVVWN 313
           K S +S NPF+                ARHLFDE P RN VVWN
Sbjct: 75  KFSLVS-NPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWN 117


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/73 (56%), Positives = 45/73 (61%)
 Frame = +2

Query: 95  DAHVFSLALKSCTATNRPILGTSIHAHSLKSSYLSNNPFIXXXXXXXXXXXXXXXXARHL 274
           DAHVFSL LKSCTA  RP LG +IHAHS KSS LS +PF+                AR L
Sbjct: 10  DAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLS-SPFVACALVDMYGKSLSVTLARKL 68

Query: 275 FDETPRRNAVVWN 313
           FDE P R+ VVWN
Sbjct: 69  FDEIPHRSVVVWN 81