BLASTX nr result

ID: Glycyrrhiza24_contig00024341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024341
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   220   1e-55
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   168   5e-40
ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806...   161   6e-38
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   151   5e-35
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   149   2e-34

>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  220 bits (560), Expect = 1e-55
 Identities = 111/159 (69%), Positives = 124/159 (77%)
 Frame = -2

Query: 480 MEENLHQESLLDVVFSWTLEDVLKENLFKYQVPKIPKTFFSTRHYMNSIIPALIEETHSD 301
           MEE LH+ SL+ VVFSWTL+D+L E LFKYQVPKIPKTF ST  Y NS  PALIEETHSD
Sbjct: 1   MEECLHRASLISVVFSWTLDDLLNETLFKYQVPKIPKTFLSTNDYTNSFFPALIEETHSD 60

Query: 300 MFSSLMSVSHAPIREISTIAASMNFDPPEDLFYEVTLKRSTSEVNDVGKYEPEVGDLFAL 121
           ++SSLMSV  A   EI T+  S  F+PP DLFY++TLK  T EV  VGKYEPEVGDL A 
Sbjct: 61  LYSSLMSVPKASFCEIRTMEISKVFNPPYDLFYKITLKNITDEVYGVGKYEPEVGDLIAF 120

Query: 120 TYIKPRSIDDLIRTKRYFQIAYIRGSKDEYTDEIPILLS 4
           T I+PRS+DDL R KRY  IAYI GSKDE+TDEIPILLS
Sbjct: 121 TNIRPRSVDDLSRIKRYCHIAYIHGSKDEFTDEIPILLS 159


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  168 bits (425), Expect = 5e-40
 Identities = 100/220 (45%), Positives = 121/220 (55%), Gaps = 53/220 (24%)
 Frame = -2

Query: 501 IEKSCDTMEENLHQESLLDVVFSWTLEDVLKENLFKYQ---------------------- 388
           +E     ME+ LH+ SL+D+VFSWTLED+L ENLFKYQ                      
Sbjct: 1   MEMRYTAMEKCLHRGSLIDIVFSWTLEDILNENLFKYQSGTFVSHKTPNLNTKWRSASGV 60

Query: 387 -------------------------------VPKIPKTFFSTRHYMNSIIPALIEETHSD 301
                                          VPKIPKTF ST  Y+NS  PALIEETHS 
Sbjct: 61  LCDAKVPFKLKRKFYRTAVRPTMLYGIECWAVPKIPKTFISTNDYVNSFFPALIEETHSY 120

Query: 300 MFSSLMSVSHAPIREISTIAASMNFDPPEDLFYEVTLKRSTSEVNDVGKYEPEVGDLFAL 121
           + SSL +V  A   EI T+  S +F+ P  LFY+ TLK +T EV  VGKYEPEVGDL A 
Sbjct: 121 LSSSLWNVPQA-FCEIRTMEISKDFNYPHALFYQTTLKNTTEEVYGVGKYEPEVGDLVAF 179

Query: 120 TYIKPRSIDDLIRTKRYFQIAYIRGSKDEYTDEIPILLSQ 1
           T ++PRS+ DL R +RY  I YI GSKDE  D+I +LLS+
Sbjct: 180 TNVRPRSVSDLSRIERYCHIGYICGSKDELNDQITMLLSK 219


>ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
          Length = 975

 Score =  161 bits (407), Expect = 6e-38
 Identities = 87/170 (51%), Positives = 112/170 (65%), Gaps = 6/170 (3%)
 Frame = -2

Query: 492 SCDTMEENLHQESLLDVVFSWTLEDVLKENLFKYQVPKIPKTFFSTRHYMNSIIPALIEE 313
           +C+  EE+    S LD+VFSW+L+D L E+L+K++V +IP+TF ST  Y+NS IP LIEE
Sbjct: 38  TCNASEEDDESASFLDIVFSWSLKDALNEDLYKHKVQRIPETFMSTSDYLNSFIPPLIEE 97

Query: 312 THSDMFSSLMSVSHAPIREISTIAASMNFDPPEDLFYEVTLKRSTSEV-----NDVGKYE 148
           T SD+ SSL  VS API EI T+     F  P  LFY + LK  T EV      D+G YE
Sbjct: 98  TRSDLCSSLKGVSRAPICEIWTVIRDRFFKLPNSLFYLIKLKTRTDEVEDEVKEDIGSYE 157

Query: 147 PEVGDLFALTYIKPRSIDDLI-RTKRYFQIAYIRGSKDEYTDEIPILLSQ 1
           PE GD+FA T I+P++I DLI R K  + IAY+ G KD  T+EIPI  S+
Sbjct: 158 PEPGDIFAFTDIRPKNIGDLINRPKLSYVIAYVCGRKDANTNEIPIRASK 207


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score =  151 bits (382), Expect = 5e-35
 Identities = 86/170 (50%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
 Frame = -2

Query: 501 IEKSCDTMEENLHQESLLDVVFSWTLEDVLKENLFKYQVPKIPKTFFSTRHYMNSIIPAL 322
           +E+SC   ++N     L++ VF+W+L+DVL +NL K++V KIP+TF ST  Y+NS IP+L
Sbjct: 1   MERSC-IAKDNEEGLDLVETVFNWSLKDVLNDNLCKHKVLKIPQTFLSTTDYLNSFIPSL 59

Query: 321 IEETHSDMFSSLMSVSHAPIREISTI--AASMNFDPPEDLFYEVTLKRSTSEVNDVGKYE 148
           IEET SD+ S+L  VS A   EIS+I    S +F P + LFY++++ RS+++VN  GKYE
Sbjct: 60  IEETRSDLCSNLKGVSRASFCEISSIELERSRSFIPTKSLFYQISVNRSSNDVN--GKYE 117

Query: 147 PEVGDLFALTYIKPRSIDDLI-RTKRYFQIAYIRGSKDEYTDEIPILLSQ 1
           PEVGDL A T IKP+++DDLI R KR + I Y+ G K E  D+I IL S+
Sbjct: 118 PEVGDLIAFTDIKPKTVDDLINRPKRNYHIGYVHGIK-ESIDKISILSSK 166


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/166 (46%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
 Frame = -2

Query: 492 SCDTMEENLHQESLLDVVFSWTLEDVLKENLFKYQVPKIPKTFFSTRHYMNSIIPALIEE 313
           S +   E+L   SL+++VFSWT  DV  +N  +++V KIP TF +  +Y+NS IP+L+EE
Sbjct: 2   SFNVEREDLDLASLVEIVFSWTFNDVRNQNFCRHKVEKIPHTFMTVTNYLNSFIPSLVEE 61

Query: 312 THSDMFSSLMSVSHAPIRE--ISTIAASMNFDPPEDLFYEVTLKRSTSEVNDVGKYEPEV 139
           THSD+ SSL  V+ AP  E  I+T   S +F   + L Y++++ R+ ++  DVG Y+PEV
Sbjct: 62  THSDLSSSLYGVNRAPFCEILIATPERSKSFISSKFLLYQISVSRTKNDTEDVGPYQPEV 121

Query: 138 GDLFALTYIKPRSIDDLIRTKRYFQIAYIRGSKDEYTDEIPILLSQ 1
           GDL ALT  KP++++DL R +RY+ IAY+ GSK E + EI IL S+
Sbjct: 122 GDLIALTDFKPKTVEDLNRPRRYYHIAYVYGSK-ESSGEISILSSK 166


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