BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024333
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   141   8e-32
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...   137   1e-30
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                         116   3e-24
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...   116   3e-24

>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  141 bits (355), Expect = 8e-32
 Identities = 85/182 (46%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
 Frame = -3

Query: 515 SASAYSLMIRTLCRAPTVFLNHIPTLLHSMTQDGVVXXXXXXXXXXXXXLQTPHNNN--- 345
           S +AYS+++RTL R    F + IP+LLHSMTQ GVV                PH+ N   
Sbjct: 71  SPAAYSVILRTLSREG--FYSDIPSLLHSMTQAGVVL--------------DPHSLNHLL 114

Query: 344 -------NFXXXXXXXXXXXHMEHLTPT-VYTSLLIASLRNNHLPLALSIFHTLLDAATL 189
                  NF           H+ HL P+ +Y SLL+A L  N L LALSIF  LL A   
Sbjct: 115 RSFIISSNFNLALQLLDYVQHL-HLDPSPIYNSLLVALLEKNQLTLALSIFFKLLGAVDS 173

Query: 188 VDVDACNHLLAALRKAGMKGEFKRVFRTLRDTKDFTFDTWGYNICIHAFGCWGDLETSLG 9
             + ACN LL ALRKA M+ EF++VF+ LR+ + F+FDTWGYN+CIHAFGCWGDL T   
Sbjct: 174 KSITACNQLLVALRKADMRVEFEQVFQRLREKRGFSFDTWGYNVCIHAFGCWGDLATCFA 233

Query: 8   VF 3
           +F
Sbjct: 234 LF 235


>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496560|gb|AES77763.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 791

 Score =  137 bits (344), Expect = 1e-30
 Identities = 85/197 (43%), Positives = 108/197 (54%), Gaps = 18/197 (9%)
 Frame = -3

Query: 539 NNNTPSSVSASAYSLMIRTLCRAPTVFL---NHIPTLLHSMTQDGVVXXXXXXXXXXXXX 369
           N+N     S+ +YSL+   LC   T F     H+P LLHSM Q+G+V             
Sbjct: 65  NSNNNIHHSSLSYSLIFNNLCNPKTPFSLLHQHLPHLLHSMKQNGIVFDSNSFNTLLNFL 124

Query: 368 LQ--TPHNNN--NFXXXXXXXXXXXHME----HLTPTVYTSLLIASLRNNHLPLALSIFH 213
           ++    HNNN  NF                    TP +Y SLLIAS++NN +PLALSIF+
Sbjct: 125 IKFGVSHNNNSKNFHFVIDILDYIQTQNLHPVDTTPFIYNSLLIASIKNNQIPLALSIFN 184

Query: 212 TLL-----DAATL--VDVDACNHLLAALRKAGMKGEFKRVFRTLRDTKDFTFDTWGYNIC 54
            ++     D   L  V V + N+LL+ LRKA MK EF+ VF  LR+ K F FD WGYNIC
Sbjct: 185 NIMTLGDDDCLNLDSVIVGSSNYLLSVLRKARMKKEFENVFNRLRERKSFDFDLWGYNIC 244

Query: 53  IHAFGCWGDLETSLGVF 3
           IHAFG WGDL TS+ +F
Sbjct: 245 IHAFGSWGDLVTSMKLF 261


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  123 bits (308), Expect = 2e-26
 Identities = 74/177 (41%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
 Frame = -3

Query: 515 SASAYSLMIRTLCRAPTVFLNHIPTLLHSMTQDGVVXXXXXXXXXXXXXLQTPHNNNNFX 336
           S  AYS + R +CRA   FL+ +P L+ SM  DGVV             ++    ++   
Sbjct: 82  SVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVVVGQETFKLLLDSLIRAGKFDSALE 141

Query: 335 XXXXXXXXXXHMEHLTPTVYTSLLIASLRNNHLPLALSIFHTLLDA------ATLVDVDA 174
                         L   VY S+L+A +R N L LAL +F  LL          + + +A
Sbjct: 142 ILDHIEELGTG---LNSYVYDSVLVALIRKNQLGLALPLFFKLLGGDEGQGGVPVPESNA 198

Query: 173 CNHLLAALRKAGMKGEFKRVFRTLRDTKDFTFDTWGYNICIHAFGCWGDLETSLGVF 3
           CN LL ALRKA MK EF+ VF  LR  KDF  DT GYNICIHAFGCWGDL T+L +F
Sbjct: 199 CNQLLVALRKADMKIEFRNVFEKLRAKKDFDLDTQGYNICIHAFGCWGDLGTALNLF 255


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score =  116 bits (290), Expect = 3e-24
 Identities = 73/186 (39%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
 Frame = -3

Query: 515 SASAYSLMIRTLCRAPTVFLNHIPTLLHSMTQDGVVXXXXXXXXXXXXXLQTPHNNNNFX 336
           SA+AYS + RT+CR  T  L  +P LL SM +DGV              +++    +   
Sbjct: 91  SATAYSQIFRTVCR--TGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148

Query: 335 XXXXXXXXXXHMEHLTPTVYTSLLIASLRNNHLPLALSIFHTLLDAAT------------ 192
                       + L P+VY S+LIA ++ + L LALSI   LL+A+             
Sbjct: 149 VLDYMEELG---DCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVII 205

Query: 191 ---LVDVDACNHLLAALRKAGMKGEFKRVFRTLRDTKDFTFDTWGYNICIHAFGCWGDLE 21
              L    A N LL  LR+A M+ EFKRVF  L+  K F FDTW YNICIH FGCWGDL+
Sbjct: 206 VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLD 265

Query: 20  TSLGVF 3
            +L +F
Sbjct: 266 AALSLF 271


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score =  116 bits (290), Expect = 3e-24
 Identities = 73/186 (39%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
 Frame = -3

Query: 515 SASAYSLMIRTLCRAPTVFLNHIPTLLHSMTQDGVVXXXXXXXXXXXXXLQTPHNNNNFX 336
           SA+AYS + RT+CR  T  L  +P LL SM +DGV              +++    +   
Sbjct: 91  SATAYSQIFRTVCR--TGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148

Query: 335 XXXXXXXXXXHMEHLTPTVYTSLLIASLRNNHLPLALSIFHTLLDAAT------------ 192
                       + L P+VY S+LIA ++ + L LALSI   LL+A+             
Sbjct: 149 VLDYMEELG---DCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVII 205

Query: 191 ---LVDVDACNHLLAALRKAGMKGEFKRVFRTLRDTKDFTFDTWGYNICIHAFGCWGDLE 21
              L    A N LL  LR+A M+ EFKRVF  L+  K F FDTW YNICIH FGCWGDL+
Sbjct: 206 VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLD 265

Query: 20  TSLGVF 3
            +L +F
Sbjct: 266 AALSLF 271