BLASTX nr result

ID: Glycyrrhiza24_contig00024332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024332
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555794.1| PREDICTED: uncharacterized protein LOC100805...    98   6e-19
gb|ACJ84680.1| unknown [Medicago truncatula]                           95   5e-18
ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
emb|CBI33853.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD...    88   6e-16

>ref|XP_003555794.1| PREDICTED: uncharacterized protein LOC100805068 [Glycine max]
          Length = 299

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/51 (92%), Positives = 47/51 (92%)
 Frame = -2

Query: 261 SIGRGGMLKVQHLVSIAKPSVSHSYVDSAGYQQPGRIAHIEFFVKPEESED 109
           SIGRGGMLKVQHLVSIAKPSVSH Y DS GYQQP RIAHIEFFVKPEESED
Sbjct: 249 SIGRGGMLKVQHLVSIAKPSVSHPYADSVGYQQPSRIAHIEFFVKPEESED 299


>gb|ACJ84680.1| unknown [Medicago truncatula]
          Length = 296

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -2

Query: 261 SIGRGGMLKVQHLVSIAKPSVSHSYVDSAGYQQPGRIAHIEFFVKPEESED 109
           SIGRGGMLKVQHLVSI+KP+ SH YVDSAGYQQPGRIAHIEFFVKPEESED
Sbjct: 247 SIGRGGMLKVQHLVSISKPT-SHPYVDSAGYQQPGRIAHIEFFVKPEESED 296


>ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|222834061|gb|EEE72538.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/55 (78%), Positives = 50/55 (90%)
 Frame = -2

Query: 261 SIGRGGMLKVQHLVSIAKPSVSHSYVDSAGYQQPGRIAHIEFFVKPEESED*MND 97
           +IGRGGMLKVQHLVS+A+PS SH ++DSAGYQQP RIA+IEFFVKPEE ED +ND
Sbjct: 249 TIGRGGMLKVQHLVSVARPSTSHQHIDSAGYQQPSRIAYIEFFVKPEEDEDTVND 303


>emb|CBI33853.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -2

Query: 261 SIGRGGMLKVQHLVSIAKPSVSHSYVDSAGYQQPGRIAHIEFFVKPEESED 109
           +IGRGGMLKVQHLVS+A+PS+ H +VDSAGYQQP RIA+IEFFVKPEE E+
Sbjct: 244 TIGRGGMLKVQHLVSVARPSIPHPHVDSAGYQQPSRIAYIEFFVKPEEYEE 294


>ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD1-like [Vitis vinifera]
          Length = 300

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -2

Query: 261 SIGRGGMLKVQHLVSIAKPSVSHSYVDSAGYQQPGRIAHIEFFVKPEESED 109
           +IGRGGMLKVQHLVS+A+PS+ H +VDSAGYQQP RIA+IEFFVKPEE E+
Sbjct: 244 TIGRGGMLKVQHLVSVARPSIPHPHVDSAGYQQPSRIAYIEFFVKPEEYEE 294


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