BLASTX nr result

ID: Glycyrrhiza24_contig00024325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024325
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   268   6e-70
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M...   255   3e-66
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              226   3e-57
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   226   3e-57
ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica...   212   3e-53

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  268 bits (684), Expect = 6e-70
 Identities = 149/190 (78%), Positives = 153/190 (80%), Gaps = 18/190 (9%)
 Frame = +3

Query: 66  MRNPK-SAASFLIARAKCLQLH------CVP-----STSKTPLFRFQPSLLSSF------ 191
           MRN K  AAS LIARAK LQLH      C P     S +   LFRF    LSS       
Sbjct: 1   MRNSKLCAASLLIARAKSLQLHHRHVRHCFPPFSSSSATSISLFRFHHPWLSSLCNAKSL 60

Query: 192 IPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTVANVDEWKWKLSMLLRSEKDQEIVSR 371
           I TRLFS   YY+LEQFSDDEYDCDFEN QASSTVANVDEWKWKLSMLLRSEKDQEIVSR
Sbjct: 61  ITTRLFSS--YYSLEQFSDDEYDCDFENQQASSTVANVDEWKWKLSMLLRSEKDQEIVSR 118

Query: 372 DRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQR 551
           DRKDRRDYEQIANLAKRMGLYSE+FGKV+VASKVPLPNYRPDLDDKRPQREVVIPLSLQR
Sbjct: 119 DRKDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQR 178

Query: 552 RVEGLLQEYL 581
           RVEGLLQEYL
Sbjct: 179 RVEGLLQEYL 188


>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 279

 Score =  255 bits (652), Expect = 3e-66
 Identities = 136/176 (77%), Positives = 145/176 (82%), Gaps = 4/176 (2%)
 Frame = +3

Query: 66  MRNPKSAASFLIARAK-CLQLHCVPS---TSKTPLFRFQPSLLSSFIPTRLFSGSGYYAL 233
           M  PKSAASFLI  AK  LQ         TS +PL          FI TR FSG  YY +
Sbjct: 1   MHIPKSAASFLIGCAKNSLQFRHRNYRFLTSTSPLLLLSTRFSKPFISTRFFSG--YYNV 58

Query: 234 EQFSDDEYDCDFENHQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANL 413
           EQFSDDEY+CDFENHQASSTVANVDEWKWKLSMLLR+EKDQEIVSRD++DRRDYEQIANL
Sbjct: 59  EQFSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYEQIANL 118

Query: 414 AKRMGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYL 581
           AKRMGLYSE+FGKV+VASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGL+QEYL
Sbjct: 119 AKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEYL 174


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  226 bits (575), Expect = 3e-57
 Identities = 115/151 (76%), Positives = 129/151 (85%), Gaps = 2/151 (1%)
 Frame = +3

Query: 135 PSTSKTPLFRFQPSLL--SSFIPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTVANVD 308
           P  S+ P F F  SL   SSFI  R   G   YA EQFSDDEYDCDFE+H+ASS+VAN+D
Sbjct: 16  PRLSRPPTFSFLSSLPTPSSFIRRRGLCG---YAAEQFSDDEYDCDFESHKASSSVANID 72

Query: 309 EWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNY 488
           EWKWKLS+L R+E+DQEIVSRD+KDRRDYEQI+NLA RMGLYSE++GKV+V SKVPLPNY
Sbjct: 73  EWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANRMGLYSEIYGKVMVVSKVPLPNY 132

Query: 489 RPDLDDKRPQREVVIPLSLQRRVEGLLQEYL 581
           RPDLDDKRPQREVVIPLSLQRRVEGLLQE+L
Sbjct: 133 RPDLDDKRPQREVVIPLSLQRRVEGLLQEHL 163


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  226 bits (575), Expect = 3e-57
 Identities = 115/151 (76%), Positives = 129/151 (85%), Gaps = 2/151 (1%)
 Frame = +3

Query: 135 PSTSKTPLFRFQPSLL--SSFIPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTVANVD 308
           P  S+ P F F  SL   SSFI  R   G   YA EQFSDDEYDCDFE+H+ASS+VAN+D
Sbjct: 16  PRLSRPPTFSFLSSLPTPSSFIRRRGLCG---YAAEQFSDDEYDCDFESHKASSSVANID 72

Query: 309 EWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNY 488
           EWKWKLS+L R+E+DQEIVSRD+KDRRDYEQI+NLA RMGLYSE++GKV+V SKVPLPNY
Sbjct: 73  EWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANRMGLYSEIYGKVMVVSKVPLPNY 132

Query: 489 RPDLDDKRPQREVVIPLSLQRRVEGLLQEYL 581
           RPDLDDKRPQREVVIPLSLQRRVEGLLQE+L
Sbjct: 133 RPDLDDKRPQREVVIPLSLQRRVEGLLQEHL 163


>ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1144

 Score =  212 bits (540), Expect = 3e-53
 Identities = 111/174 (63%), Positives = 136/174 (78%), Gaps = 3/174 (1%)
 Frame = +3

Query: 66  MRNPKSAASFLIARAKCLQLHCVPSTSKTPLFRFQPSLLS---SFIPTRLFSGSGYYALE 236
           M N K   +FL+  +K   + C  S++     R    LL    S+  +R++  S +YA E
Sbjct: 1   MHNFKRLPNFLLVLSK--NISCDLSSNHGLAVRPLKLLLQQSRSYSVSRVWRCSYHYAAE 58

Query: 237 QFSDDEYDCDFENHQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLA 416
           QFSDDEY+CD +N+ ASS+VAN+DEWKWKLS+L R+EKDQEIVSRD +DRRD+EQI+NLA
Sbjct: 59  QFSDDEYECDGDNNTASSSVANIDEWKWKLSLLSRNEKDQEIVSRDNRDRRDFEQISNLA 118

Query: 417 KRMGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEY 578
           K+MGLY  M+GKV+VASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQE+
Sbjct: 119 KKMGLYCSMYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEH 172


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