BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024323
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612353.1| Pentatricopeptide repeat-containing protein ...   221   5e-56
gb|EEE61158.1| hypothetical protein OsJ_15125 [Oryza sativa Japo...    86   2e-15
emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group] g...    86   2e-15
ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea m...    81   1e-13

>ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513688|gb|AES95311.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/122 (89%), Positives = 115/122 (94%)
 Frame = +3

Query: 3   RTTFLRIQGATLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQI 182
           RTTFL+IQGATL+AVLKSCE +SDLPAGRQIHSLIVKSS+C HTLVGNALVHMYSEC+QI
Sbjct: 445 RTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQI 504

Query: 183 GDAFKAFVDIVWKDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISAC 362
            DAFKAFVDIV KDDSSWSSIIGTCKQN MES+ALELCKEML EGI FTSYSLPLCISAC
Sbjct: 505 DDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISAC 564

Query: 363 SQ 368
           SQ
Sbjct: 565 SQ 566


>gb|EEE61158.1| hypothetical protein OsJ_15125 [Oryza sativa Japonica Group]
          Length = 314

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +3

Query: 27  GATLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFV 206
           G TL +VLK+C  E D   G ++H L VKS +   TLV NALV MY++C  +  A + F 
Sbjct: 165 GCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF- 223

Query: 207 DIVW----KDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACSQ 368
              W    +D +SW+S I  C QNGM  EAL+L + M ++G +  SY+    +  C++
Sbjct: 224 --EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAE 279


>emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
           gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza
           sativa Indica Group] gi|116310420|emb|CAH67428.1|
           OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +3

Query: 27  GATLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFV 206
           G TL +VLK+C  E D   G ++H L VKS +   TLV NALV MY++C  +  A + F 
Sbjct: 163 GCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF- 221

Query: 207 DIVW----KDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACSQ 368
              W    +D +SW+S I  C QNGM  EAL+L + M ++G +  SY+    +  C++
Sbjct: 222 --EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAE 277



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = +3

Query: 33  TLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDI 212
           T + VL+ C + + L  GR++H+ ++K       +  NAL+ MY+ C  +  A + F +I
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGT-EFNIQCNALLVMYARCGWVDSALRVFREI 325

Query: 213 VWKDDSSWSSIIGTCKQNGMESEALELCKEMLAEG 317
             KD  SW+S++    QN + +EA++   EM+  G
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG 360



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/110 (28%), Positives = 53/110 (48%)
 Frame = +3

Query: 36  LIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDIV 215
           L+ +L +    S L  G++IH  +++        V ++LV MYS C  +  A K F +  
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAK 628

Query: 216 WKDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACS 365
            KD   W+++I     +G   +A+ + K ML  G++    S    + ACS
Sbjct: 629 CKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACS 678


>ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Glycine max]
          Length = 773

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/118 (33%), Positives = 71/118 (60%)
 Frame = +3

Query: 15  LRIQGATLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAF 194
           + +   T+++VL +C     L  GR++H+ I+KS++  +  VG+ LV  Y +C++   AF
Sbjct: 536 IHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTLVWFYCKCKEYSYAF 595

Query: 195 KAFVDIVWKDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACSQ 368
           K    + ++D  SW++II  C + G+E EALE  +EM+ EG+   SY+    + AC++
Sbjct: 596 KVLQYMPFRDVVSWTAIISGCARLGLEHEALEFLQEMMEEGVLPNSYTYSSALKACAE 653



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/110 (33%), Positives = 62/110 (56%)
 Frame = +3

Query: 39  IAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDIVW 218
           + ++  C    DL  G+QIH+ I+KS    + +V NA+VH Y++C  I  AF+AF  +  
Sbjct: 343 VCIMNLCGRRVDLELGKQIHARILKSR-WRNLIVDNAVVHFYAKCGNISSAFRAFDCMAE 401

Query: 219 KDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACSQ 368
           +D   W+++I  C Q G   EAL +  +ML++G     Y++   + AC +
Sbjct: 402 RDVICWTTMITACSQQGFGHEALSMLSQMLSDGFYPNEYTICSALKACGE 451



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/110 (35%), Positives = 58/110 (52%)
 Frame = +3

Query: 33  TLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDI 212
           T  + LK+C +      G+ IHS   K+    +  V +AL++MYS+C  + DAF+ F ++
Sbjct: 643 TYSSALKACAELEAPIQGKLIHSYASKTPASSNVFVNSALIYMYSKCGYVADAFQVFDNM 702

Query: 213 VWKDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISAC 362
             ++  SW S+I    +NG   EAL+L   M AEG     Y     ISAC
Sbjct: 703 PERNVVSWESMILAYARNGHAREALKLMHRMQAEGFVVDDYIHTTVISAC 752



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/110 (27%), Positives = 54/110 (49%)
 Frame = +3

Query: 33  TLIAVLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDI 212
           T+ + LK+C +   L  G Q+H  I+K        +G +LV MY++C  + D+   F  +
Sbjct: 441 TICSALKACGENKALKFGTQLHGAIIKKICKSDVFIGTSLVDMYAKCGVMVDSKVVFDRM 500

Query: 213 VWKDDSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISAC 362
             ++ ++W+SII    +NG   EA    + M  + I     ++   + AC
Sbjct: 501 RIRNTATWTSIISGYARNGFGEEATSFFRLMKMKRIHVNKLTVLSVLMAC 550


>tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/107 (38%), Positives = 63/107 (58%)
 Frame = +3

Query: 45  VLKSCEDESDLPAGRQIHSLIVKSSVCHHTLVGNALVHMYSECRQIGDAFKAFVDIVWKD 224
           VLK+C    DL AGR++H  +++++      V   L+ MY++C  + +A+  F D   +D
Sbjct: 177 VLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRD 236

Query: 225 DSSWSSIIGTCKQNGMESEALELCKEMLAEGITFTSYSLPLCISACS 365
            + W+S+I  C QNG  +EAL LC+ M AEGI  T  +L   ISA +
Sbjct: 237 AAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAA 283