BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024311
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521320.1| PREDICTED: RNA polymerase-associated protein...   115   4e-24
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   114   8e-24
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   114   1e-23
ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like ...   107   8e-22
ref|XP_003554309.1| PREDICTED: RNA polymerase-associated protein...   102   4e-20

>ref|XP_003521320.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 644

 Score =  115 bits (288), Expect = 4e-24
 Identities = 64/107 (59%), Positives = 73/107 (68%)
 Frame = +2

Query: 2   ELQREMILSDRATKKDDKFLLGKIASKREKVKKATVSREETPPLPLXXXXXXXXXXXXXX 181
           ELQREMILS+RATKK DK+ LGKIASKREK KK TV+ ++T PLP               
Sbjct: 115 ELQREMILSERATKKHDKYFLGKIASKREKGKK-TVAGKQTSPLPPSRVRSSARSADRST 173

Query: 182 XXXXXLNELRAKRLKQQDPETQRRLREASRSAGPGHFPPKGKPYASM 322
                LNELRAKRLKQQD E  RR  EASRS+GPGHF PK KP+ ++
Sbjct: 174 AKDGALNELRAKRLKQQDSEANRRPSEASRSSGPGHFSPKHKPFPNL 220


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score =  114 bits (285), Expect = 8e-24
 Identities = 69/110 (62%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   ELQREMILSDRATKKDDKFLLGKIASKREKVKKATVSREETPPLPLXXXXXXXXXXXXXX 181
           ELQREMILSDRATKKDDK LLGKIASKREK K A V R+++PP+                
Sbjct: 122 ELQREMILSDRATKKDDKNLLGKIASKREKGKVA-VPRKQSPPMS-SSRMRASARSADRS 179

Query: 182 XXXXXLNELRAKRLKQQDPETQRRLREASRSAGPGHF-PPKGKPYASMGL 328
                LNELRAKRLKQQDPE  RRLREASR+AG  HF PPK KP+ S  L
Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSL 229


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/110 (61%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   ELQREMILSDRATKKDDKFLLGKIASKREKVKKATVSREETPPLPLXXXXXXXXXXXXXX 181
           ELQREMILSDRATKKDDK LLGKIASKREK  KA   R+++PP+                
Sbjct: 122 ELQREMILSDRATKKDDKNLLGKIASKREK-GKAAAPRKQSPPMS-SSRMRASARSADRS 179

Query: 182 XXXXXLNELRAKRLKQQDPETQRRLREASRSAGPGHF-PPKGKPYASMGL 328
                LNELRAKRLKQQDPE  RRLREASR+AGP HF PPK K + S  L
Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSL 229


>ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
           truncatula] gi|355500443|gb|AES81646.1| RNA
           polymerase-associated protein RTF1-like protein
           [Medicago truncatula]
          Length = 624

 Score =  107 bits (268), Expect = 8e-22
 Identities = 62/103 (60%), Positives = 66/103 (64%)
 Frame = +2

Query: 2   ELQREMILSDRATKKDDKFLLGKIASKREKVKKATVSREETPPLPLXXXXXXXXXXXXXX 181
           ELQREMILSDRA KKDDK +L KIASKREK     VSR ETPPLP               
Sbjct: 100 ELQREMILSDRAAKKDDKDILSKIASKREK---GNVSRRETPPLPSSRMMSSTRSYDRSA 156

Query: 182 XXXXXLNELRAKRLKQQDPETQRRLREASRSAGPGHFPPKGKP 310
                LNELRAKRLKQ+DPETQR L+E S+SAG G     GKP
Sbjct: 157 AKDGALNELRAKRLKQRDPETQRELKEGSKSAGSGVLSKIGKP 199


>ref|XP_003554309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 646

 Score =  102 bits (253), Expect = 4e-20
 Identities = 61/108 (56%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   ELQREMILSDRATKKDDKFLLGKIASKREKVKKATVSREETPPLPLXXXXXXXXXXXXXX 181
           ELQREMILS+RATKK DK LLGKIASKREK  K TV+ + T PL                
Sbjct: 114 ELQREMILSERATKKHDKDLLGKIASKREK-GKTTVAGKLTSPLTPSHVRSSARSANRST 172

Query: 182 XXXXXLNELRAKRLKQQDPETQRRLREASRSAGPGHFPPKGKPYASMG 325
                LNELRAKRLKQQD E  RR  +ASRS+GPG   PK +P+ S+G
Sbjct: 173 AKDGALNELRAKRLKQQDSEANRRPSKASRSSGPGLVSPKHRPFPSLG 220