BLASTX nr result

ID: Glycyrrhiza24_contig00024302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024302
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...   288   8e-76
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   284   1e-74
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   127   1e-27
emb|CBI22382.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...    86   4e-15

>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  288 bits (736), Expect = 8e-76
 Identities = 149/211 (70%), Positives = 164/211 (77%)
 Frame = -3

Query: 633  KSSLDRHXXXXXXXXXXXXXXXXXDSNRRKELSHVPAGSKNKASLCNNIENTSLTIPVTD 454
            KSSL+RH                 +SNRRKE S + AG ++KA  CN+IENT LTI V+D
Sbjct: 828  KSSLNRHNNSIILLSDDEDDEKMSNSNRRKEFSLMLAGPRDKAIPCNDIENTKLTISVSD 887

Query: 453  AAVMGEKDAITLPCEDMSLNSTQLLHVKQECHDQRGPVLASTPVDLSFHIGITSAESVRN 274
            +AVMGEKDAITLP E+MS +ST LLHVK+ECH+Q G VL ST VDLS H+G+TS ES RN
Sbjct: 888  SAVMGEKDAITLPRENMSSDSTWLLHVKEECHEQTGTVLTSTLVDLSCHMGLTSTESTRN 947

Query: 273  IPASSTVEASDHCSESLEICPPNPQHSGTIKAKNEDNHEKFRGCATSNVADNARAVNGNI 94
            IPA S VEASDHC ESLE+CPPNPQ SG IK K EDNHEK  GC TSNVADNARAVNGN 
Sbjct: 948  IPAPSKVEASDHCLESLEVCPPNPQLSG-IKVKTEDNHEKLGGCTTSNVADNARAVNGNF 1006

Query: 93   SSGPNNYRQKGPRIAKVVRRINCNVEPLEFG 1
            S GPNNYRQKGPRIAKVVRRINCNVEPLEFG
Sbjct: 1007 SCGPNNYRQKGPRIAKVVRRINCNVEPLEFG 1037


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  284 bits (726), Expect = 1e-74
 Identities = 147/211 (69%), Positives = 164/211 (77%)
 Frame = -3

Query: 633  KSSLDRHXXXXXXXXXXXXXXXXXDSNRRKELSHVPAGSKNKASLCNNIENTSLTIPVTD 454
            KSSL+RH                  SNRRKELS +    ++K S CN+IENT LTI V+D
Sbjct: 828  KSSLNRHNNSIILLSDDEDDEKMSGSNRRKELSSMLTCPRDKTSPCNDIENTKLTISVSD 887

Query: 453  AAVMGEKDAITLPCEDMSLNSTQLLHVKQECHDQRGPVLASTPVDLSFHIGITSAESVRN 274
            +AV+GEKDAITLP E+MS +ST+LLHVKQECH+  G VLASTPVDLS H+G+TS ES+RN
Sbjct: 888  SAVIGEKDAITLPRENMSSDSTRLLHVKQECHEHTGTVLASTPVDLSCHMGLTSTESIRN 947

Query: 273  IPASSTVEASDHCSESLEICPPNPQHSGTIKAKNEDNHEKFRGCATSNVADNARAVNGNI 94
            IPA S VEASD+C ESLE+CP NPQ SG IK K EDNHE   GCATSNVADNARAVNGNI
Sbjct: 948  IPAPSKVEASDYCLESLEVCPLNPQLSG-IKVKTEDNHENLGGCATSNVADNARAVNGNI 1006

Query: 93   SSGPNNYRQKGPRIAKVVRRINCNVEPLEFG 1
            S  PNNYRQKGPRIAKVVRRINCNVEPLEFG
Sbjct: 1007 SCAPNNYRQKGPRIAKVVRRINCNVEPLEFG 1037


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score =  127 bits (320), Expect = 1e-27
 Identities = 80/180 (44%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
 Frame = -3

Query: 519  SKNKASLCNNIENTSLTIPVTDAAVMGEKDAITLPCEDMSLNSTQLLHVKQECHDQRGPV 340
            S  K + CN ++++ LT P T+AAV+GE++AI+L   +M   S+  +  K E H + G +
Sbjct: 871  SDAKVNTCNYVKDSVLTTPATNAAVLGERNAISLLHGEMKNCSSFSMFAKDEDHGKGGML 930

Query: 339  LASTPVDLSFHIGITSAESVRN-IPASSTVEASDH--CSESLEICPPNPQHSGTIKAKNE 169
            L S P++ SFH+G TS +S RN +  S+T E SD    +    +  P P   G  K   E
Sbjct: 931  LGSNPLNCSFHVGSTSIDSDRNALYLSTTRENSDFNVVNAGSYLQHPLPHVGG--KPNGE 988

Query: 168  DNHEKFRGCATSNVADNARAVNGNISSGPNN----YRQKGPRIAKVVRRINCNVEPLEFG 1
            DN++K    A   + DNAR + GN S   NN    +RQKGPRIAKVVRRINC VEPLEFG
Sbjct: 989  DNNDKVGPAAGPKLIDNARTIAGNPSCSQNNLDRYFRQKGPRIAKVVRRINCIVEPLEFG 1048


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 66/177 (37%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
 Frame = -3

Query: 519  SKNKASLCNNIENTSLTIPVTDAAVMGEKDAITLPCEDMSLNSTQLLHVKQECHDQRGPV 340
            S  K + CN ++++ LT P T+AAV+GE++AI+L   +M   ST +        D+    
Sbjct: 809  SDAKVNTCNYVKDSVLTTPATNAAVLGERNAISLLHGEMKNCSTSI------DSDRNALY 862

Query: 339  LASTPVDLSFHIGITSAESVRNIPASSTVEASDHCSESLEICPPNPQHSGTIKAKNEDNH 160
            L++T  +  F++                V A  +         P P   G  K   EDN+
Sbjct: 863  LSTTRENSDFNV----------------VNAGSYLQH------PLPHVGG--KPNGEDNN 898

Query: 159  EKFRGCATSNVADNARAVNGNISSGPNN----YRQKGPRIAKVVRRINCNVEPLEFG 1
            +K    A   + DNAR + GN S   NN    +RQKGPRIAKVVRRINC VEPLEFG
Sbjct: 899  DKVGPAAGPKLIDNARTIAGNPSCSQNNLDRYFRQKGPRIAKVVRRINCIVEPLEFG 955


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 69/186 (37%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
 Frame = -3

Query: 546  KELSHVPAGSKNKASLCNNIENTSLTIPVTDAAVMGEKDAITLPCEDMSLNSTQLLHVKQ 367
            +ELS  P+ SK+ AS+ +              AV+ + +AI  P E    +    + +K 
Sbjct: 804  EELSDKPSSSKDIASMTD--------------AVISKNNAICSPNEHRINSLFVPVKLKD 849

Query: 366  ECHDQRGPVLASTPVDLSFHIGITSAESVRNIPASSTVEASDHCSESLEICPPNPQHSGT 187
             C  +   VL S   + S  +G T+    RNI  SS +  ++           + Q  G+
Sbjct: 850  VCLQESEIVLESN-ANSSCQLGSTAGFG-RNIQDSSNMRETNKDRNIANAGSEHVQQIGS 907

Query: 186  IKAKNEDNHEKFRGCATSNVADNARAVNGNISSGPNN----YRQKGPRIAKVVRRINCNV 19
             K  +ED   K    ATSN  DN+RA+ G+ S   NN    +RQKGPRIAKVVRRINCNV
Sbjct: 908  AKPNDED---KMGADATSNSVDNSRAMAGSPSCSQNNLDRYFRQKGPRIAKVVRRINCNV 964

Query: 18   EPLEFG 1
            EPLEFG
Sbjct: 965  EPLEFG 970


Top