BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024270
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-56
ref|XP_003602633.1| Pentatricopeptide repeat-containing protein ...   204   6e-51
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_002516308.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35

>ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 737

 Score =  221 bits (562), Expect = 6e-56
 Identities = 105/125 (84%), Positives = 114/125 (91%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           LNNALIDAYGKCGEPN+S SVF +MPERNVVSWTSMVV YT+A RLD+ACRVF DMPVKN
Sbjct: 139 LNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPVKN 198

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLEQGVRPSAPTFVSVLDACASESLIGRGKQVHG 360
           TVSWTAL+TGF RNG C EA D+F QMLE+GVRPSAPTFVSV+DACA E+LIGRGKQVHG
Sbjct: 199 TVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHG 258

Query: 361 QIIRG 375
           QIIRG
Sbjct: 259 QIIRG 263



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/98 (34%), Positives = 52/98 (53%)
 Frame = +1

Query: 85  NVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTVSWTALITGFARNGRCYEALDIFHQML 264
           NV    +++  Y K   +  A  +F   P+++ V+W  LITGFA+NG   E+L +F +M+
Sbjct: 271 NVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMI 330

Query: 265 EQGVRPSAPTFVSVLDACASESLIGRGKQVHGQIIRGY 378
           E  V P+  TF+ VL  C    L   G Q+   + R Y
Sbjct: 331 EAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQY 368



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/70 (38%), Positives = 41/70 (58%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           L N LIDAY KCG    +   F  +P +   SW +++  Y+K    D+A  +F+ MP +N
Sbjct: 47  LANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRN 106

Query: 181 TVSWTALITG 210
            VS+ +LI+G
Sbjct: 107 VVSYNSLISG 116


>ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491681|gb|AES72884.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/129 (74%), Positives = 114/129 (88%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           LNNALIDAYGKCGEPN S  +F  M E++ VSWTSMVVTYT+ASR+DDAC+VFN+MPVK 
Sbjct: 249 LNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY 308

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLEQGVRPSAPTFVSVLDACASESLIGRGKQVHG 360
           TVSW ALI+GF +NGRCYEAL++FHQM+++GV P A TFVSVLDACASE+LIGRGKQVH 
Sbjct: 309 TVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHC 368

Query: 361 QIIRGYNNN 387
           QIIRG +++
Sbjct: 369 QIIRGRSSD 377



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = +1

Query: 85  NVVSWTSMVVTYTKASRLDDACRVFNDM-PVKNTVSWTALITGFARNGRCYEALDIFHQM 261
           NV  + +++  Y K   +  A  +F  M  VK+ VSW  LITGFA+NGR  ++L +F +M
Sbjct: 381 NVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRM 440

Query: 262 LEQGVRPSAPTFVSVLDACASESLIGRGKQVHGQIIRGY 378
           +E  + P+  TF+ VL AC    L+  G ++   + R Y
Sbjct: 441 IESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRY 479



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           L N LID Y KCG        F  +P +   +W +++  Y+K    + A ++F++MP +N
Sbjct: 115 LANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRN 174

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLE--QGVRPSAPTFVSVLDACASESLIGRGKQV 354
            VS+ +LI+G  R+    EA+  F +M     G+     T VS++  C+    +   +QV
Sbjct: 175 LVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQV 234

Query: 355 HG-QIIRGYNNN 387
           HG   I G+  N
Sbjct: 235 HGVATIVGFRTN 246


>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/124 (66%), Positives = 98/124 (79%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           + NALIDAYGKCGEP++S S+F  MPER+VVSWTSMV  Y +ASRL+DA  +F+ M  KN
Sbjct: 185 IGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKN 244

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLEQGVRPSAPTFVSVLDACASESLIGRGKQVHG 360
           TVSWTALI GFA+NGR  EAL +F QM E+G+ PSA TF SVL ACA  +LI RGK++HG
Sbjct: 245 TVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHG 304

Query: 361 QIIR 372
            IIR
Sbjct: 305 HIIR 308



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           L N LID Y KC     +  VFH +P +N  SW  ++  Y+++   ++A  + + MP  N
Sbjct: 51  LANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPN 110

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLEQ--GVRPSAPTFVSVLDACASESLIGRGKQV 354
            VS+ +LI+G   +G   E+L++F  ML+Q   V     T VS++ +CAS       +QV
Sbjct: 111 LVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQV 170

Query: 355 HG-QIIRGYNNN 387
           HG  II G N+N
Sbjct: 171 HGAAIIIGLNSN 182



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/98 (33%), Positives = 56/98 (57%)
 Frame = +1

Query: 85  NVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTVSWTALITGFARNGRCYEALDIFHQML 264
           N+    +++  Y K  ++  A  +F  M  K+ VSW +LITGFA+NG   E+L +F +M+
Sbjct: 317 NIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMI 376

Query: 265 EQGVRPSAPTFVSVLDACASESLIGRGKQVHGQIIRGY 378
           E  +RP+  TF+ +L AC    L+  G ++   + + Y
Sbjct: 377 EADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDY 414


>ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544538|gb|EEF46055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/122 (65%), Positives = 97/122 (79%)
 Frame = +1

Query: 7   NALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTV 186
           NALID+YGKCG+ N S  +F  M ER+VVSWTSMV  Y +ASR+DDA R+F +MPVKNTV
Sbjct: 138 NALIDSYGKCGQHNTSYCIFSRMFERDVVSWTSMVDAYARASRMDDAFRLFMEMPVKNTV 197

Query: 187 SWTALITGFARNGRCYEALDIFHQMLEQGVRPSAPTFVSVLDACASESLIGRGKQVHGQI 366
           SWT+LI GFA+NG  Y+AL++F QM E+ V PSA TFV+VL ACA  +LI RGKQ+HG I
Sbjct: 198 SWTSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGACADLALIERGKQIHGHI 257

Query: 367 IR 372
           IR
Sbjct: 258 IR 259



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/90 (36%), Positives = 51/90 (56%)
 Frame = +1

Query: 85  NVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTVSWTALITGFARNGRCYEALDIFHQML 264
           N+  + +++  Y K   +  +  +F  M  K+ VSW +LITG A+NG   E+LD+F +M+
Sbjct: 268 NMYVYNALIDMYCKCGDMKSSKSLFEGMSEKDIVSWNSLITGLAQNGHAEESLDLFRKMV 327

Query: 265 EQGVRPSAPTFVSVLDACASESLIGRGKQV 354
           E    P+  TF  VL AC   S  GR K++
Sbjct: 328 EGNRLPNHVTFSGVLSAC---SHTGRKKEI 354


>ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
           gi|449526377|ref|XP_004170190.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 577

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/122 (59%), Positives = 91/122 (74%)
 Frame = +1

Query: 7   NALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTV 186
           NA++DAYGKCG+P+ S S+F  M ER+VV+WTSMVV Y + SRLDDA RVF+ MPVKN  
Sbjct: 184 NAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVH 243

Query: 187 SWTALITGFARNGRCYEALDIFHQMLEQGVRPSAPTFVSVLDACASESLIGRGKQVHGQI 366
           +WTALI    +N    EALD+F QMLE+   P+A TFV VL ACA  +LI +GK++HG I
Sbjct: 244 TWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLI 303

Query: 367 IR 372
           IR
Sbjct: 304 IR 305



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = +1

Query: 1   LNNALIDAYGKCGEPNVSCSVFHWMPERNVVSWTSMVVTYTKASRLDDACRVFNDMPVKN 180
           L N LID Y KC     +   F  +P RN+ SW +++ +Y++A     A +VF++MP  N
Sbjct: 48  LANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPHPN 107

Query: 181 TVSWTALITGFARNGRCYEALDIFHQMLEQG--VRPSAPTFVSVLDACASESLIGRGKQV 354
            VS+  LI+ F  +G   E+++IF QM +    +     T VS+   CA    +   +QV
Sbjct: 108 IVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQV 167

Query: 355 HGQII 369
           HG  I
Sbjct: 168 HGAAI 172



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/87 (41%), Positives = 53/87 (60%)
 Frame = +1

Query: 85  NVVSWTSMVVTYTKASRLDDACRVFNDMPVKNTVSWTALITGFARNGRCYEALDIFHQML 264
           NV    +++  Y+K+  +  A  +FN +  K+ VSW +LITGFA+NG   EAL  F +M 
Sbjct: 314 NVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMT 373

Query: 265 EQGVRPSAPTFVSVLDACASESLIGRG 345
           E G+RP+  TF++VL AC+   L   G
Sbjct: 374 EVGIRPNKVTFLAVLSACSHTGLSSEG 400