BLASTX nr result
ID: Glycyrrhiza24_contig00024263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00024263
(653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G... 256 4e-83
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ... 250 4e-81
ref|XP_003600546.1| DNA primase small subunit [Medicago truncatu... 248 1e-80
gb|AFK46602.1| unknown [Medicago truncatula] 248 4e-79
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V... 221 2e-70
>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
Length = 434
Score = 256 bits (655), Expect(2) = 4e-83
Identities = 127/139 (91%), Positives = 130/139 (93%), Gaps = 1/139 (0%)
Frame = -3
Query: 528 QLLQSGKHKAQGLRRCIEEIVFFFTYPRLDMEVSKHMNHLLKAPFCAHPKTGRVCVPIDP 349
QLLQSGKHKAQGLRRCIEEIVF FTYPRLDMEVSKHMNHLLKAPFC HPKTGRVCVPIDP
Sbjct: 296 QLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 355
Query: 348 DRCEEFDPTTVPTLSQLIEQLNNEGSRADVN-EWNGTSLGNAITLFRSSFLEPLLKACKE 172
RCEEFDPTTVPTLSQLIE+LN EGSRAD + E N TSLGNAITLFRSSFL+PLLKACKE
Sbjct: 356 KRCEEFDPTTVPTLSQLIEELNYEGSRADADGESNRTSLGNAITLFRSSFLQPLLKACKE 415
Query: 171 EIERSYNLKLQQSKNSLGW 115
EIE SYNLKLQQSKNSLGW
Sbjct: 416 EIENSYNLKLQQSKNSLGW 434
Score = 77.8 bits (190), Expect(2) = 4e-83
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -2
Query: 652 YEKILNMIPDESIASELRGKWQYGRRSSSAKEDINVVRWEQ 530
YEKIL+MIPDESIASELRG+WQ RRSSSAKEDINVVRWEQ
Sbjct: 253 YEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQ 293
>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
[Glycine max]
Length = 435
Score = 250 bits (639), Expect(2) = 4e-81
Identities = 124/140 (88%), Positives = 129/140 (92%), Gaps = 2/140 (1%)
Frame = -3
Query: 528 QLLQSGKHKAQGLRRCIEEIVFFFTYPRLDMEVSKHMNHLLKAPFCAHPKTGRVCVPIDP 349
QLLQSGKHKAQGLRRCIEEIVF FTYPRLDMEVSKHMNHLLKAPFC HPKTGRVCVPIDP
Sbjct: 296 QLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 355
Query: 348 DRCEEFDPTTVPTLSQLIEQLNNEGSRADVN--EWNGTSLGNAITLFRSSFLEPLLKACK 175
RCEEFDPTTVPTLSQLIE+LN EGSRADV+ E+N T+LGNAITLFR SFL+PLLKACK
Sbjct: 356 KRCEEFDPTTVPTLSQLIEELNYEGSRADVDGAEFNRTTLGNAITLFRLSFLQPLLKACK 415
Query: 174 EEIERSYNLKLQQSKNSLGW 115
EEIE SY LKLQQSKNSL W
Sbjct: 416 EEIENSYYLKLQQSKNSLAW 435
Score = 77.4 bits (189), Expect(2) = 4e-81
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = -2
Query: 652 YEKILNMIPDESIASELRGKWQYGRRSSSAKEDINVVRWEQ 530
YEKIL MIPDESIASELRG+WQ RRSSSAKEDINVVRWEQ
Sbjct: 253 YEKILGMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQ 293
>ref|XP_003600546.1| DNA primase small subunit [Medicago truncatula]
gi|355489594|gb|AES70797.1| DNA primase small subunit
[Medicago truncatula]
Length = 433
Score = 248 bits (632), Expect(2) = 1e-80
Identities = 118/139 (84%), Positives = 130/139 (93%), Gaps = 1/139 (0%)
Frame = -3
Query: 528 QLLQSGKHKAQGLRRCIEEIVFFFTYPRLDMEVSKHMNHLLKAPFCAHPKTGRVCVPIDP 349
QLLQSGKHK+QGLRRC+EEIVF +TYPRLDMEVSKHMNHLLKAPFC HPKTGRVCVPIDP
Sbjct: 295 QLLQSGKHKSQGLRRCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 354
Query: 348 DRCEEFDPTTVPTLSQLIEQLNNEGSRADVN-EWNGTSLGNAITLFRSSFLEPLLKACKE 172
+RC+EFDPTTVPT+ QL+E+LNNEG RADVN E +GTSLGN++TLFRSSFLEPL K KE
Sbjct: 355 NRCDEFDPTTVPTVFQLLEELNNEGLRADVNGERSGTSLGNSVTLFRSSFLEPLQKGSKE 414
Query: 171 EIERSYNLKLQQSKNSLGW 115
EIERSYNLKLQQSKNS+GW
Sbjct: 415 EIERSYNLKLQQSKNSIGW 433
Score = 78.6 bits (192), Expect(2) = 1e-80
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -2
Query: 652 YEKILNMIPDESIASELRGKWQYGRRSSSAKEDINVVRWEQ 530
YEKIL+MIPDESIASELRGKWQ RRSSSAKEDIN+VRWEQ
Sbjct: 252 YEKILSMIPDESIASELRGKWQDSRRSSSAKEDINIVRWEQ 292
>gb|AFK46602.1| unknown [Medicago truncatula]
Length = 433
Score = 248 bits (632), Expect(2) = 4e-79
Identities = 118/139 (84%), Positives = 130/139 (93%), Gaps = 1/139 (0%)
Frame = -3
Query: 528 QLLQSGKHKAQGLRRCIEEIVFFFTYPRLDMEVSKHMNHLLKAPFCAHPKTGRVCVPIDP 349
QLLQSGKHK+QGLRRC+EEIVF +TYPRLDMEVSKHMNHLLKAPFC HPKTGRVCVPIDP
Sbjct: 295 QLLQSGKHKSQGLRRCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 354
Query: 348 DRCEEFDPTTVPTLSQLIEQLNNEGSRADVN-EWNGTSLGNAITLFRSSFLEPLLKACKE 172
+RC+EFDPTTVPT+ QL+E+LNNEG RADVN E +GTSLGN++TLFRSSFLEPL K KE
Sbjct: 355 NRCDEFDPTTVPTVFQLLEELNNEGLRADVNGERSGTSLGNSVTLFRSSFLEPLQKGSKE 414
Query: 171 EIERSYNLKLQQSKNSLGW 115
EIERSYNLKLQQSKNS+GW
Sbjct: 415 EIERSYNLKLQQSKNSIGW 433
Score = 73.2 bits (178), Expect(2) = 4e-79
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -2
Query: 652 YEKILNMIPDESIASELRGKWQYGRRSSSAKEDINVVRWEQ 530
YEKIL+MIPDESIASELRGKWQ RRSSSAKEDIN+VR EQ
Sbjct: 252 YEKILSMIPDESIASELRGKWQDSRRSSSAKEDINIVRREQ 292
>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
Length = 457
Score = 221 bits (564), Expect(2) = 2e-70
Identities = 105/138 (76%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
Frame = -3
Query: 525 LLQSGKHKAQGLRRCIEEIVFFFTYPRLDMEVSKHMNHLLKAPFCAHPKTGRVCVPIDPD 346
+LQSGK KAQGLRRC+EEIVF +TYPRLDMEVSKHMNHLLKAPFC HPKTGRVCVPIDP
Sbjct: 320 MLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPK 379
Query: 345 RCEEFDPTTVPTLSQLIEQLNNEGSRADV-NEWNGTSLGNAITLFRSSFLEPLLKACKEE 169
CEEFDPT+VPTLS+L+E+LN G RAD +EW TSLG ++ FR SFL+PLLK+CKEE
Sbjct: 380 SCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKEE 439
Query: 168 IERSYNLKLQQSKNSLGW 115
IE +YN KLQ SKNSL W
Sbjct: 440 IESAYNAKLQLSKNSLSW 457
Score = 70.5 bits (171), Expect(2) = 2e-70
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -2
Query: 652 YEKILNMIPDESIASELRGKWQYGRRSSSAKEDINVVRWEQ 530
YEKIL +IPDESI SELRGKWQ RRSS +KEDIN +RWEQ
Sbjct: 276 YEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQ 316