BLASTX nr result

ID: Glycyrrhiza24_contig00024238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024238
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526957.1| PREDICTED: F-box protein At1g67340-like [Gly...   236   1e-60
ref|XP_003523145.1| PREDICTED: F-box protein At1g67340-like [Gly...   232   3e-59
ref|XP_003595414.1| F-box family protein [Medicago truncatula] g...   217   9e-55
ref|XP_003602817.1| F-box family protein [Medicago truncatula] g...   217   1e-54
gb|AFK42506.1| unknown [Medicago truncatula]                          217   1e-54

>ref|XP_003526957.1| PREDICTED: F-box protein At1g67340-like [Glycine max]
          Length = 348

 Score =  236 bits (603), Expect = 1e-60
 Identities = 130/193 (67%), Positives = 141/193 (73%), Gaps = 10/193 (5%)
 Frame = -1

Query: 549 IRPKNWSESAHHFLNRCANAGNLDACYTLGMIRFYCLQNRRSGLSLIAKAAIKSHAPALY 370
           I+PKNWSE AH FL  C NAGN+DACYTLGMIRFYCL+NR SGLSL+AKAA+K HAPALY
Sbjct: 70  IKPKNWSEYAHSFLKHCVNAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALY 129

Query: 369 SLAVIHFNGSGVS---RDLRAGVALCARASLLGHIDALRELGHCIHDGYGTRQNVTEGRR 199
           SLAVI FNGSG S   +DLRAGVAL ARASLLGHIDALRELGHC+ DGYG RQNVTEGRR
Sbjct: 130 SLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRR 189

Query: 198 LLAQANVWELAFVVRAVAQXXXXXXXXXLTWRNGRFRECACRAGSVSSLACV----YGYI 31
           LL QANV ELA+V+RAVA               G  R       +VSSLAC     YGY 
Sbjct: 190 LLVQANVRELAYVLRAVAPPSRCCDESSSLLTWGALRCQRKNNNAVSSLACPLLSDYGYS 249

Query: 30  GA---VQPVNWFM 1
            A   VQP NWF+
Sbjct: 250 VAPPEVQPANWFL 262


>ref|XP_003523145.1| PREDICTED: F-box protein At1g67340-like [Glycine max]
          Length = 344

 Score =  232 bits (592), Expect = 3e-59
 Identities = 130/191 (68%), Positives = 143/191 (74%), Gaps = 8/191 (4%)
 Frame = -1

Query: 549 IRPKNWSESAHHFLNRCANAGNLDACYTLGMIRFYCLQNRRSGLSLIAKAAIKSHAPALY 370
           I+PKNWSE AH FL  CANAGN+DACYTLGMIRFYCL+NR SGLSL+AKAA+K HAPALY
Sbjct: 70  IKPKNWSEYAHSFLKHCANAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALY 129

Query: 369 SLAVIHFNGSGVS---RDLRAGVALCARASLLGHIDALRELGHCIHDGYGTRQNVTEGRR 199
           SLAVI FNGSG S   +DLRAGVAL ARASLLGHIDALRELGHC+ DGYG RQNVTEGRR
Sbjct: 130 SLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRR 189

Query: 198 LLAQANVWELAFVVRAVAQXXXXXXXXXLTWRNGRFRECACRAGSVSS--LACVYGYIGA 25
           LL QANV ELA+V+RAVA          LTWR  R +       +V +  L   YGY  A
Sbjct: 190 LLVQANVRELAYVLRAVA-PSRCYETSLLTWRALRCQRNNNNNNAVVACPLLSDYGYNVA 248

Query: 24  ---VQPVNWFM 1
              VQP NWF+
Sbjct: 249 APEVQPANWFL 259


>ref|XP_003595414.1| F-box family protein [Medicago truncatula]
           gi|355484462|gb|AES65665.1| F-box family protein
           [Medicago truncatula]
          Length = 344

 Score =  217 bits (553), Expect = 9e-55
 Identities = 106/135 (78%), Positives = 117/135 (86%), Gaps = 3/135 (2%)
 Frame = -1

Query: 549 IRPKNWSESAHHFLNRCANAGNLDACYTLGMIRFYCLQNRRSGLSLIAKAAIKSHAPALY 370
           I+PKNWSE++HHFL RC N GN+DACYTLGMIRFYCL+NRRSG+SLIAKAA+K HAPALY
Sbjct: 73  IKPKNWSENSHHFLKRCVNVGNVDACYTLGMIRFYCLRNRRSGVSLIAKAAMKLHAPALY 132

Query: 369 SLAVIHFNGSG---VSRDLRAGVALCARASLLGHIDALRELGHCIHDGYGTRQNVTEGRR 199
           SLAVI FNGSG     +DLRAGVAL ARASLLGHIDALRELGHC+ DGYG +QNVTEGRR
Sbjct: 133 SLAVIQFNGSGGTKQDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVKQNVTEGRR 192

Query: 198 LLAQANVWELAFVVR 154
           LL QANV E+  V R
Sbjct: 193 LLVQANVREILLVYR 207


>ref|XP_003602817.1| F-box family protein [Medicago truncatula]
           gi|355491865|gb|AES73068.1| F-box family protein
           [Medicago truncatula]
          Length = 446

 Score =  217 bits (552), Expect = 1e-54
 Identities = 105/135 (77%), Positives = 117/135 (86%), Gaps = 3/135 (2%)
 Frame = -1

Query: 549 IRPKNWSESAHHFLNRCANAGNLDACYTLGMIRFYCLQNRRSGLSLIAKAAIKSHAPALY 370
           ++PKNWSE++HHFL RC N GN+DACYTLGMIRFYCL+NRRSG+SLIAKAA+K HAPALY
Sbjct: 73  VKPKNWSENSHHFLKRCVNVGNVDACYTLGMIRFYCLRNRRSGVSLIAKAAMKLHAPALY 132

Query: 369 SLAVIHFNGSG---VSRDLRAGVALCARASLLGHIDALRELGHCIHDGYGTRQNVTEGRR 199
           SLAVI FNGSG     +DLRAGVAL ARASLLGHIDALRELGHC+ DGYG +QNVTEGRR
Sbjct: 133 SLAVIQFNGSGGTKQDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVKQNVTEGRR 192

Query: 198 LLAQANVWELAFVVR 154
           LL QANV E+  V R
Sbjct: 193 LLVQANVREILLVYR 207


>gb|AFK42506.1| unknown [Medicago truncatula]
          Length = 351

 Score =  217 bits (552), Expect = 1e-54
 Identities = 105/135 (77%), Positives = 117/135 (86%), Gaps = 3/135 (2%)
 Frame = -1

Query: 549 IRPKNWSESAHHFLNRCANAGNLDACYTLGMIRFYCLQNRRSGLSLIAKAAIKSHAPALY 370
           ++PKNWSE++HHFL RC N GN+DACYTLGMIRFYCL+NRRSG+SLIAKAA+K HAPALY
Sbjct: 73  VKPKNWSENSHHFLKRCVNVGNVDACYTLGMIRFYCLRNRRSGVSLIAKAAMKLHAPALY 132

Query: 369 SLAVIHFNGSG---VSRDLRAGVALCARASLLGHIDALRELGHCIHDGYGTRQNVTEGRR 199
           SLAVI FNGSG     +DLRAGVAL ARASLLGHIDALRELGHC+ DGYG +QNVTEGRR
Sbjct: 133 SLAVIQFNGSGGTKQDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVKQNVTEGRR 192

Query: 198 LLAQANVWELAFVVR 154
           LL QANV E+  V R
Sbjct: 193 LLVQANVREILLVYR 207


Top