BLASTX nr result

ID: Glycyrrhiza24_contig00024218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024218
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...    96   2e-18
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...    95   5e-18
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...    95   7e-18
ref|XP_002517473.1| structure-specific recognition protein, puta...    93   2e-17
ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, ...    93   3e-17

>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +3

Query: 3   KWKKMSAEEKEPYEAKARADKKRYQDEISGYQNPQPMNIDSGNESDSA 146
           KWKK+SAEEKEPYEAKAR DKKRY DEISGY+NPQPMNIDSGNESDSA
Sbjct: 567 KWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQPMNIDSGNESDSA 614


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +3

Query: 3   KWKKMSAEEKEPYEAKARADKKRYQDEISGYQNPQPMNIDSGNESDSA 146
           KWKK+S EEKEPYEAKAR DKKRY+DEISGY+NPQPMNIDSGNESDSA
Sbjct: 593 KWKKLSVEEKEPYEAKAREDKKRYKDEISGYKNPQPMNIDSGNESDSA 640


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = +3

Query: 3   KWKKMSAEEKEPYEAKARADKKRYQDEISGYQNPQPMNIDSGNESDSA 146
           KWK +SAEEKEPYEAKA+ADKKRY+DEISGY+NPQPMN+DSGNESDSA
Sbjct: 595 KWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESDSA 642


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/47 (87%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   KWKKMSAEEKEPYEAKARADKKRYQDEISGYQNPQPMNIDSGNESDS 143
           KWKK+SAEEKEPYEAKARADKKRY++E+SGY+NPQPM+IDSGNESDS
Sbjct: 593 KWKKLSAEEKEPYEAKARADKKRYKEEVSGYKNPQPMDIDSGNESDS 639


>ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 303

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +3

Query: 3   KWKKMSAEEKEPYEAKARADKKRYQDEISGYQNPQPMNIDSGNESDSA 146
           KW KMSAEEKEPYE+KAR DKKRY++EISGY+NPQPMNIDSGNESDSA
Sbjct: 256 KWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 303


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