BLASTX nr result

ID: Glycyrrhiza24_contig00024215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024215
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530304.1| PREDICTED: GC-rich sequence DNA-binding fact...   166   1e-39
ref|XP_003528569.1| PREDICTED: GC-rich sequence DNA-binding fact...   161   6e-38
ref|XP_003556701.1| PREDICTED: GC-rich sequence DNA-binding fact...   157   8e-37
ref|XP_003610832.1| GC-rich sequence DNA-binding factor-like pro...   139   2e-31
emb|CBI27069.3| unnamed protein product [Vitis vinifera]              132   2e-29

>ref|XP_003530304.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 896

 Score =  166 bits (421), Expect = 1e-39
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = -3

Query: 307 VIVLKGLVKPLSAPEPQGRESDSEEEHKEFQAKFASVGIQNGKDSLIPDEDTIRAIRAKR 128
           VIVLKGLVKP+ + EPQGR SDSE EHKE + K +S+GIQNGKDS  PDE+TI+AIRAKR
Sbjct: 135 VIVLKGLVKPVVS-EPQGRHSDSEGEHKEVEGKLSSLGIQNGKDSFFPDEETIKAIRAKR 193

Query: 127 ERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 2
           ERLR+ARPAA DYISLDGGSNHGAAEGLSDEEPEFRGRIAMF
Sbjct: 194 ERLRKARPAAPDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 235


>ref|XP_003528569.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 913

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/102 (81%), Positives = 91/102 (89%)
 Frame = -3

Query: 307 VIVLKGLVKPLSAPEPQGRESDSEEEHKEFQAKFASVGIQNGKDSLIPDEDTIRAIRAKR 128
           VIVLKGLVKPL + EPQGR+S SE EH+E +AK A+VGIQN + S  PD++TIRAIRAKR
Sbjct: 145 VIVLKGLVKPLGS-EPQGRDSYSEGEHREVEAKLATVGIQNKEGSFYPDDETIRAIRAKR 203

Query: 127 ERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 2
           ERLRQARPAA DYISLDGGSNHGAAEGLSDEEPEFRGRIAMF
Sbjct: 204 ERLRQARPAAPDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 245


>ref|XP_003556701.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 904

 Score =  157 bits (397), Expect = 8e-37
 Identities = 84/104 (80%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 VIVLKGLVKPLSAPEPQGRESDS--EEEHKEFQAKFASVGIQNGKDSLIPDEDTIRAIRA 134
           VIVLKG VKPL  PE QGR+SDS  E EH+E +AK A+VGIQN +DS  PDE+TIRAIRA
Sbjct: 146 VIVLKGHVKPLG-PETQGRDSDSDSEGEHREVEAKLATVGIQNKEDSFYPDEETIRAIRA 204

Query: 133 KRERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 2
           KRERLR ARPAA DYISLDGGSNHGAAEGLSDEEPEFRGRIAMF
Sbjct: 205 KRERLRLARPAAPDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 248


>ref|XP_003610832.1| GC-rich sequence DNA-binding factor-like protein [Medicago
           truncatula] gi|355512167|gb|AES93790.1| GC-rich sequence
           DNA-binding factor-like protein [Medicago truncatula]
          Length = 892

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/102 (73%), Positives = 88/102 (86%)
 Frame = -3

Query: 307 VIVLKGLVKPLSAPEPQGRESDSEEEHKEFQAKFASVGIQNGKDSLIPDEDTIRAIRAKR 128
           VIVLKGL+KP+++ EP   ESDSEE + EF+AKFASVGI+NGKDS  P E+ I+A +AKR
Sbjct: 139 VIVLKGLLKPVTS-EP---ESDSEE-NGEFEAKFASVGIKNGKDSFFPGEEDIKAAKAKR 193

Query: 127 ERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 2
           ER+R+A  AA DYISLDGGSNHGAAEGLSDEEPE+RGRIAMF
Sbjct: 194 ERMRKAGAAAPDYISLDGGSNHGAAEGLSDEEPEYRGRIAMF 235


>emb|CBI27069.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  132 bits (333), Expect = 2e-29
 Identities = 71/102 (69%), Positives = 85/102 (83%)
 Frame = -3

Query: 307 VIVLKGLVKPLSAPEPQGRESDSEEEHKEFQAKFASVGIQNGKDSLIPDEDTIRAIRAKR 128
           VIVLKGLVKP+SA E    ++  +EE+++ + + AS+GI  G+DS IPD+ TI AIRAKR
Sbjct: 154 VIVLKGLVKPISAAE----DAVIDEENEDTETRLASMGIGKGRDS-IPDQATINAIRAKR 208

Query: 127 ERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMF 2
           ERLRQ+R AA DYISLDGGSNHGAAEGLSDEEPEF+GRIAMF
Sbjct: 209 ERLRQSRAAAPDYISLDGGSNHGAAEGLSDEEPEFQGRIAMF 250


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